RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 TTC9BQ8N6N2 239 aa8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 KDF1Q8NAX2 398 aaPredicted RBP8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 GIPC2Q8TF65 315 aa8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 SPIRE2Q8WWL2 714 aa8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 BICD1Q96G01 975 aa8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 SENP8Q96LD8 212 aa8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 FAM83CQ9BQN1 747 aa8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 TIPINQ9BVW5 301 aa8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 HPS4Q9NQG7 708 aa8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 POLR3BQ9NW08 1133 aaPredicted RBP8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 ZMYM5Q9UJ78 669 aa8.61□□□□□ -1.03
NSMCE2-213ENST00000523824 ZFYVE26Q68DK2 2539 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 PDCD11Q14690 1871 aaKnown RBP8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 BCLAF3A2AJT9 711 aaKnown RBP8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 OTOL1A6NHN0 477 aaPredicted RBP8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 KHNYNO15037 678 aaKnown RBP8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 APBB3O95704 486 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 MAPTP10636 758 aaKnown RBP8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 PLS3P13797 630 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 SPINK2P20155 84 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 PAX3P23760 479 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 GBP1P32455 592 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 CDR1P51861 262 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 DGKEP52429 567 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 LILRA4P59901 499 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 ANAPC15P60006 121 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 RAD51AP2Q09MP3 1159 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 MAPK7Q13164 816 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 PSMD2Q13200 908 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 ZRSR1Q15695 479 aaKnown RBP8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 FBXO43Q4G163 708 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 SH3PXD2AQ5TCZ1 1133 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 METTL23Q86XA0 190 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 THEM5Q8N1Q8 247 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 C4orf32Q8N8J7 132 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 MAB21L3Q8N8X9 362 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 IGSF22Q8N9C0 903 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 TMEM161BQ8NDZ6 487 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 RPLP0P6Q8NHW5 317 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 C8orf76Q96K31 380 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 TSPAN18Q96SJ8 248 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 P2RY13Q9BPV8 354 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 FOXP1Q9H334 677 aaPredicted RBP8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 RPF1Q9H9Y2 349 aaKnown RBP8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 IL21Q9HBE4 155 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 FBRSL1Q9HCM7 1045 aaKnown RBP8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 TMEM9BQ9NQ34 198 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 TDP1Q9NUW8 608 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 NOL7Q9UMY1 257 aaKnown RBP8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 CCL26Q9Y258 94 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 ZZEF1O43149 2961 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 GREB1Q4ZG55 1949 aa8.6□□□□□ -1.03
NSMCE2-213ENST00000523824 IGF2RP11717 2491 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 TMEM8BA6NDV4 472 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 PP2D1A8MPX8 630 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 H0YCG3 227 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 PPEF2O14830 753 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 CEACAM1P13688 526 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 HOXB3P14651 431 aaPredicted RBP8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 ARSAP15289 507 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 ATF6P18850 670 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 GUCY2CP25092 1073 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 DDX6P26196 483 aaKnown RBP eCLIP8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 U2AF2P26368 475 aaKnown RBP eCLIP8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 CDC25AP30304 524 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 GJA4P35212 333 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 TNFSF9P41273 254 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 TRAPPC10P48553 1259 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 LIG4P49917 911 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 DMC1Q14565 340 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 NBR1Q14596 966 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 PDGFRLQ15198 375 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 ENOX2Q16206 610 aaKnown RBP8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 USP39Q53GS9 565 aaKnown RBP8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 SPATA1Q5VX52 437 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 C9orf57Q5W0N0 161 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 TXNDC8Q6A555 127 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 SYT13Q7L8C5 426 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 C11orf74Q86VG3 221 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 CPA6Q8N4T0 437 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 TTC16Q8NEE8 873 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 OR10T2Q8NGX3 314 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 C2orf15Q8WU43 125 aaKnown RBP8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 MRPS31Q92665 395 aaKnown RBP8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 USP13Q92995 863 aaPredicted RBP8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 CD101Q93033 1021 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 ACDQ96AP0 544 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 CHFRQ96EP1 664 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 HAPLN2Q9GZV7 340 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 ZCWPW1Q9H0M4 648 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 KIF9Q9HAQ2 790 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 EBF1Q9UH73 591 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 DSEQ9UL01 958 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 INVSQ9Y283 1065 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 PCDHB13Q9Y5F0 798 aa8.59□□□□□ -1.03
NSMCE2-213ENST00000523824 LNP1A1A4G5 178 aa8.58□□□□□ -1.04
NSMCE2-213ENST00000523824 CYB561D2O14569 222 aa8.58□□□□□ -1.04
NSMCE2-213ENST00000523824 OGTO15294 1046 aa8.58□□□□□ -1.04
NSMCE2-213ENST00000523824 TOP3BO95985 862 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms