RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TRAK2O60296 914 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 RPP40O75818 363 aaKnown RBP28.03■■■□□ 2.08
PVT1-219ENST00000523427 CCDC192P0DO97 292 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 KBTBD6Q86V97 674 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 LRRTM3Q86VH5 581 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 CD302Q8IX05 232 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 CMTM8Q8IZV2 173 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 KCTD17Q8N5Z5 321 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 STKLD1Q8NE28 680 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 TTC16Q8NEE8 873 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 TSPAN18Q96SJ8 248 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 PARVGQ9HBI0 331 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 RXFP3Q9NSD7 469 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 HSFX1Q9UBD0 423 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 SLC8A2Q9UPR5 921 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 CCL26Q9Y258 94 aa28.03■■■□□ 2.08
PVT1-219ENST00000523427 TISP43B9A030 160 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 ANKRD63C9JTQ0 380 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 PIGRP01833 764 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 CYP11A1P05108 521 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 ADRB2P07550 413 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 GRSF1Q12849 480 aaKnown RBP eCLIP28.02■■■□□ 2.08
PVT1-219ENST00000523427 PTPAQ15257 358 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 WSCD1Q658N2 575 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 RASSF8Q8NHQ8 419 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 GAB3Q8WWW8 586 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 CALML4Q96GE6 196 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 SMOC1Q9H4F8 434 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 DSEQ9UL01 958 aa28.02■■■□□ 2.08
PVT1-219ENST00000523427 MAGED2Q9UNF1 606 aaPredicted RBP28.02■■■□□ 2.08
PVT1-219ENST00000523427 KIF26AQ9ULI4 1882 aaPredicted RBP28.02■■■□□ 2.08
PVT1-219ENST00000523427 ATG2BQ96BY7 2078 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 ANO9A1A5B4 782 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 FOXD2O60548 495 aaPredicted RBP28.01■■■□□ 2.07
PVT1-219ENST00000523427 HOXA6P31267 233 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 AVPR1AP37288 418 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 UBA7P41226 1012 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 BFSP1Q12934 665 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 RUNX3Q13761 415 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 MCM6Q14566 821 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 ADALQ6DHV7 355 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 FSTL4Q6MZW2 842 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 LRRC15Q8TF66 581 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 KIF2CQ99661 725 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 HPS4Q9NQG7 708 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 DPP3Q9NY33 737 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 KIF3AQ9Y496 699 aa28.01■■■□□ 2.07
PVT1-219ENST00000523427 NUP210Q8TEM1 1887 aaPredicted RBP28■■■□□ 2.07
PVT1-219ENST00000523427 OTOL1A6NHN0 477 aaPredicted RBP28■■■□□ 2.07
PVT1-219ENST00000523427 H3BQV1 296 aa28■■■□□ 2.07
PVT1-219ENST00000523427 HAPLN1P10915 354 aaPredicted RBP28■■■□□ 2.07
PVT1-219ENST00000523427 TAF6P49848 677 aa28■■■□□ 2.07
PVT1-219ENST00000523427 ZC2HC1CQ53FD0 456 aaPredicted RBP28■■■□□ 2.07
PVT1-219ENST00000523427 CACNA2D4Q7Z3S7 1137 aa28■■■□□ 2.07
PVT1-219ENST00000523427 FAM83CQ9BQN1 747 aa28■■■□□ 2.07
PVT1-219ENST00000523427 ANK1P16157 1881 aa28■■■□□ 2.07
PVT1-219ENST00000523427 TBCAO75347 108 aaKnown RBP27.99■■■□□ 2.07
PVT1-219ENST00000523427 EGFP01133 1207 aa27.99■■■□□ 2.07
PVT1-219ENST00000523427 ARSAP15289 507 aa27.99■■■□□ 2.07
PVT1-219ENST00000523427 PAX3P23760 479 aa27.99■■■□□ 2.07
PVT1-219ENST00000523427 WEE1P30291 646 aa27.99■■■□□ 2.07
PVT1-219ENST00000523427 GPR15P49685 360 aa27.99■■■□□ 2.07
PVT1-219ENST00000523427 TMEM196Q5HYL7 178 aa27.99■■■□□ 2.07
PVT1-219ENST00000523427 SDHAF4Q5VUM1 108 aa27.99■■■□□ 2.07
PVT1-219ENST00000523427 TXNDC8Q6A555 127 aa27.99■■■□□ 2.07
PVT1-219ENST00000523427 DDX1Q92499 740 aaKnown RBP27.99■■■□□ 2.07
PVT1-219ENST00000523427 USP13Q92995 863 aaPredicted RBP27.99■■■□□ 2.07
PVT1-219ENST00000523427 IKZF4Q9H2S9 585 aa27.99■■■□□ 2.07
PVT1-219ENST00000523427 RNF40O75150 1001 aa27.98■■■□□ 2.07
PVT1-219ENST00000523427 NLRP12P59046 1061 aa27.98■■■□□ 2.07
PVT1-219ENST00000523427 N4BP2L1Q5TBK1 243 aaPredicted RBP27.98■■■□□ 2.07
PVT1-219ENST00000523427 ARL6IP4Q66PJ3 421 aaKnown RBP27.98■■■□□ 2.07
PVT1-219ENST00000523427 CC2D1AQ6P1N0 951 aaPredicted RBP27.98■■■□□ 2.07
PVT1-219ENST00000523427 TMEM150AQ86TG1 271 aa27.98■■■□□ 2.07
PVT1-219ENST00000523427 SPPL2BQ8TCT7 592 aa27.98■■■□□ 2.07
PVT1-219ENST00000523427 HHIPQ96QV1 700 aa27.98■■■□□ 2.07
PVT1-219ENST00000523427 PI4K2AQ9BTU6 479 aa27.98■■■□□ 2.07
PVT1-219ENST00000523427 ASB7Q9H672 318 aa27.98■■■□□ 2.07
PVT1-219ENST00000523427 FBRSL1Q9HCM7 1045 aaKnown RBP27.98■■■□□ 2.07
PVT1-219ENST00000523427 BLOC1S4Q9NUP1 217 aa27.98■■■□□ 2.07
PVT1-219ENST00000523427 AGO2Q9UKV8 859 aaKnown RBP27.98■■■□□ 2.07
PVT1-219ENST00000523427 DERAQ9Y315 318 aa27.98■■■□□ 2.07
PVT1-219ENST00000523427 SCN1AP35498 2009 aa27.97■■■□□ 2.07
PVT1-219ENST00000523427 ATG13O75143 517 aa27.97■■■□□ 2.07
PVT1-219ENST00000523427 PRPF40AO75400 957 aaKnown RBP27.97■■■□□ 2.07
PVT1-219ENST00000523427 ZNF806P0C7X5 589 aa27.97■■■□□ 2.07
PVT1-219ENST00000523427 ZNF131P52739 623 aa27.97■■■□□ 2.07
PVT1-219ENST00000523427 KARSQ15046 597 aaKnown RBP27.97■■■□□ 2.07
PVT1-219ENST00000523427 NAIF1Q69YI7 327 aaPredicted RBP27.97■■■□□ 2.07
PVT1-219ENST00000523427 DCP1BQ8IZD4 617 aaKnown RBP27.97■■■□□ 2.07
PVT1-219ENST00000523427 C2orf15Q8WU43 125 aaKnown RBP27.97■■■□□ 2.07
PVT1-219ENST00000523427 TMLHEQ9NVH6 421 aa27.97■■■□□ 2.07
PVT1-219ENST00000523427 PCDHB5Q9Y5E4 795 aa27.97■■■□□ 2.07
PVT1-219ENST00000523427 EPN2O95208 641 aa27.96■■■□□ 2.07
PVT1-219ENST00000523427 F11P03951 625 aa27.96■■■□□ 2.07
PVT1-219ENST00000523427 PLCG1P19174 1290 aa27.96■■■□□ 2.07
PVT1-219ENST00000523427 STPG1Q5TH74 334 aa27.96■■■□□ 2.07
PVT1-219ENST00000523427 MRPS31Q92665 395 aaKnown RBP27.96■■■□□ 2.07
PVT1-219ENST00000523427 KCNN1Q92952 543 aa27.96■■■□□ 2.07
PVT1-219ENST00000523427 CHFRQ96EP1 664 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms