RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 KRT23Q9C075 422 aa4.24□□□□□ -1.73
NPM1-210ENST00000523339 RWDD1Q9H446 243 aaPredicted RBP4.24□□□□□ -1.73
NPM1-210ENST00000523339 C8orf33Q9H7E9 229 aaPredicted RBP4.24□□□□□ -1.73
NPM1-210ENST00000523339 RXFP1Q9HBX9 757 aa4.24□□□□□ -1.73
NPM1-210ENST00000523339 ZNF334Q9HCZ1 680 aaPredicted RBP4.24□□□□□ -1.73
NPM1-210ENST00000523339 HELLSQ9NRZ9 838 aa4.24□□□□□ -1.73
NPM1-210ENST00000523339 KCNH7Q9NS40 1196 aa4.24□□□□□ -1.73
NPM1-210ENST00000523339 HCFC1R1Q9NWW0 138 aa4.24□□□□□ -1.73
NPM1-210ENST00000523339 SEPT3Q9UH03 358 aa4.24□□□□□ -1.73
NPM1-210ENST00000523339 WASF3Q9UPY6 502 aa4.24□□□□□ -1.73
NPM1-210ENST00000523339 PCDHB2Q9Y5E7 798 aa4.24□□□□□ -1.73
NPM1-210ENST00000523339 SF3B1O75533 1304 aaKnown RBP eCLIP4.23□□□□□ -1.731e-6■■■■□ 23.4
NPM1-210ENST00000523339 FRMPD4Q14CM0 1322 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 AKAP13Q12802 2813 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 WDFY3Q8IZQ1 3526 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 BCLAF3A2AJT9 711 aaKnown RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 MEIS3P2A8K0S8 358 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 DCLK1O15075 740 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 FOXP2O15409 715 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 RRP8O43159 456 aaKnown RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 EXTL3O43909 919 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 OPHN1O60890 802 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 ERLIN2O94905 339 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 PAPSS2O95340 614 aaPredicted RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 C1RP00736 705 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 F13BP05160 661 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 RHOP08100 348 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 CEBPBP17676 345 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 PTPN2P17706 415 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 HOXA9P31269 272 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 MLH1P40692 756 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 SOX9P48436 509 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 ARPP19P56211 112 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 NLRP12P59046 1061 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 CFHR1Q03591 330 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 GFPT1Q06210 699 aaPredicted RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 GRSF1Q12849 480 aaKnown RBP eCLIP4.23□□□□□ -1.73
NPM1-210ENST00000523339 HNRNPDQ14103 355 aaKnown RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 ALX1Q15699 326 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 UBE2SQ16763 222 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 IMMTQ16891 758 aaKnown RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 TMEM132AQ24JP5 1023 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 UVSSAQ2YD98 709 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 FAM78AQ5JUQ0 283 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 TTC22Q5TAA0 569 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 FAM171A1Q5VUB5 890 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 LMBRD2Q68DH5 695 aaPredicted RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 FUT10Q6P4F1 479 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 PDXDC1Q6P996 788 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 ARMCX6Q7L4S7 300 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 CATIPQ7Z7H3 387 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 TBC1D10CQ8IV04 446 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 CCDC60Q8IWA6 550 aaPredicted RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 TMEFF1Q8IYR6 380 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 SYNPOQ8N3V7 929 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 CNNM3Q8NE01 707 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 CTCFLQ8NI51 663 aaPredicted RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 HASPINQ8TF76 798 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 SMARCD2Q92925 531 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 ZC3H10Q96K80 434 aaKnown RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 SPACA7Q96KW9 195 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 MXRA8Q9BRK3 442 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 TTPALQ9BTX7 342 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 CEP41Q9BYV8 373 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 CNNM2Q9H8M5 875 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 CACNA2D2Q9NY47 1150 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 FNIP2Q9P278 1114 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 DNMT3BQ9UBC3 853 aaKnown RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 GABBR1Q9UBS5 961 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 MAD2L2Q9UI95 211 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 FBXW11Q9UKB1 542 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 ADAM28Q9UKQ2 775 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 PCDHA6Q9UN73 950 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 APOBEC2Q9Y235 224 aaKnown RBP4.23□□□□□ -1.73
NPM1-210ENST00000523339 INVSQ9Y283 1065 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 PCDHA8Q9Y5H6 950 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 UBIAD1Q9Y5Z9 338 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 LAMA5O15230 3695 aa4.23□□□□□ -1.73
NPM1-210ENST00000523339 COL4A3Q01955 1670 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 NFASCO94856 1347 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 TTC41PQ6P2S7 1318 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 MYO18BQ8IUG5 2567 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 DMXL2Q8TDJ6 3036 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 TENM4Q6N022 2769 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 LOC400499M0QZD8 3231 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 A0A087WZ62 844 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 CCDC163A0A0D9SF12 145 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 ARL5CA6NH57 179 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 PATE3B3GLJ2 98 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 SPECC1L-ADORA2AF8WAN1 911 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 PYCARD-AS1I3L0S3 204 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 IFIT3O14879 490 aaKnown RBP4.22□□□□□ -1.73
NPM1-210ENST00000523339 SMNDC1O75940 238 aaKnown RBP eCLIP4.22□□□□□ -1.731e-8■■□□□ 14.3
NPM1-210ENST00000523339 APBB3O95704 486 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 MYL4P12829 197 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 DRD2P14416 443 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 ENGP17813 658 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 SDSP20132 328 aa4.22□□□□□ -1.73
NPM1-210ENST00000523339 MX1P20591 662 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms