RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ALPLP05186 524 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 TMEM191BP0C7N4 346 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 CYP2C18P33260 490 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 TARDBPQ13148 414 aaKnown RBP eCLIP3.66□□□□□ -1.82
PCM1-217ENST00000522998 TWIST1Q15672 202 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 DALRD3Q5D0E6 543 aaKnown RBP3.66□□□□□ -1.82
PCM1-217ENST00000522998 PCID2Q5JVF3 399 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 RBM20Q5T481 1227 aaKnown RBP3.66□□□□□ -1.82
PCM1-217ENST00000522998 NAPRTQ6XQN6 538 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 USP43Q70EL4 1123 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 C16orf52Q8NHV5 167 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 FAM136AQ96C01 138 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 LYZL4Q96KX0 146 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 PPP1R10Q96QC0 940 aaKnown RBP3.66□□□□□ -1.82
PCM1-217ENST00000522998 VKORC1Q9BQB6 163 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 TDP1Q9NUW8 608 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 DLL3Q9NYJ7 618 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 KLHL13Q9P2N7 655 aa3.66□□□□□ -1.82
PCM1-217ENST00000522998 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.66□□□□□ -1.82
PCM1-217ENST00000522998 PDE8AO60658 829 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 ANXA1P04083 346 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 CD6P30203 668 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 MTNR1BP49286 362 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 NANOS2P60321 138 aaKnown RBP3.65□□□□□ -1.83
PCM1-217ENST00000522998 CYP4F2P78329 520 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 HOXA4Q00056 320 aaPredicted RBP3.65□□□□□ -1.83
PCM1-217ENST00000522998 HYAL1Q12794 435 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 SEMA3AQ14563 771 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 Q6ZTC4 211 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 WDR53Q7Z5U6 358 aaPredicted RBP3.65□□□□□ -1.83
PCM1-217ENST00000522998 KRT78Q8N1N4 520 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 RBMXL3Q8N7X1 1067 aaKnown RBP3.65□□□□□ -1.83
PCM1-217ENST00000522998 IFI44Q8TCB0 444 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 SMOC2Q9H3U7 446 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 CCM2LQ9NUG4 571 aaPredicted RBP3.65□□□□□ -1.83
PCM1-217ENST00000522998 INTUQ9ULD6 942 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 PROCRQ9UNN8 238 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 MAPRE3Q9UPY8 281 aa3.65□□□□□ -1.83
PCM1-217ENST00000522998 A0A087X0B3 334 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 CD8B2A6NJW9 211 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 SOAT2O75908 522 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 ITGALP20701 1170 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 HTRA4P83105 476 aaPredicted RBP3.64□□□□□ -1.83
PCM1-217ENST00000522998 CDC42EP1Q00587 391 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 ERV3-1Q14264 604 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 TRIM72Q6ZMU5 477 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 RNF180Q86T96 592 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 PSD4Q8NDX1 1056 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 CYP2W1Q8TAV3 490 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 NRG4Q8WWG1 115 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 COQ8BQ96D53 544 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 ZC3H10Q96K80 434 aaKnown RBP3.64□□□□□ -1.83
PCM1-217ENST00000522998 FAM118BQ9BPY3 351 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 VTA1Q9NP79 307 aa3.64□□□□□ -1.83
PCM1-217ENST00000522998 FAM90A8PA6NJQ4 464 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 PRSS44E7EML9 344 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 KRT86O43790 486 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 PDHA1P08559 390 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 FAM90A13PP0C7W8 464 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 FAM90A24PP0C7X0 464 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 MYCLP1P12525 358 aaPredicted RBP3.63□□□□□ -1.83
PCM1-217ENST00000522998 KRT10P13645 584 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 LPOP22079 712 aaPredicted RBP3.63□□□□□ -1.83
PCM1-217ENST00000522998 ATP5F1P24539 256 aaPredicted RBP3.63□□□□□ -1.83
PCM1-217ENST00000522998 IL1R2P27930 398 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 GPR3P46089 330 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 HTR6P50406 440 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 ZNF280AP59817 542 aaPredicted RBP3.63□□□□□ -1.83
PCM1-217ENST00000522998 GTF2H3Q13889 308 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 KRT81Q14533 505 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 RBMS2Q15434 407 aaKnown RBP3.63□□□□□ -1.83
PCM1-217ENST00000522998 TAF2Q6P1X5 1199 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 DDX46Q7L014 1031 aaKnown RBP3.63□□□□□ -1.83
PCM1-217ENST00000522998 SCAMP4Q969E2 229 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 RITA1Q96K30 269 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 MACROD1Q9BQ69 325 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 SERHLQ9NQF3 203 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 C14orf119Q9NWQ9 140 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 ETAA1Q9NY74 926 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 GPR45Q9Y5Y3 372 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 NOTCH4Q99466 2003 aa3.63□□□□□ -1.83
PCM1-217ENST00000522998 LY6G6EA0A0G2JKS1 128 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 PPM1DO15297 605 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 IGSF3O75054 1194 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 CDC45O75419 566 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 PRF1P14222 555 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 ENGP17813 658 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 MT3P25713 68 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 KCNJ5P48544 419 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 STRN3Q13033 797 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 TRIM71Q2Q1W2 868 aaKnown RBP3.62□□□□□ -1.83
PCM1-217ENST00000522998 CERKLQ49MI3 558 aaPredicted RBP3.62□□□□□ -1.83
PCM1-217ENST00000522998 VPS53Q5VIR6 699 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 C9orf47Q6ZRZ4 202 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 MIGA2Q7L4E1 593 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 FAM109AQ8N4B1 249 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 SLC2A13Q96QE2 648 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 HIPK2Q9H2X6 1198 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 FOXP1Q9H334 677 aaPredicted RBP3.62□□□□□ -1.83
PCM1-217ENST00000522998 DUSP22Q9NRW4 184 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms