RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 OR5B17Q8NGF7 314 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 ZNF507Q8TCN5 953 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 SPPL2BQ8TCT7 592 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 DNASE1L2Q92874 299 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 ANKRD36BP1Q96IX9 119 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 BCO2Q9BYV7 579 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 TRPV4Q9HBA0 871 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 INTS13Q9NVM9 706 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 DDX43Q9NXZ2 648 aaKnown RBP22.28■■□□□ 1.16
SDCBP-209ENST00000522243 SIX4Q9UIU6 781 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 ITGA11Q9UKX5 1188 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 GTF3C3Q9Y5Q9 886 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 SNX9Q9Y5X1 595 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 COL4A2P08572 1712 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 PTPRJQ12913 1337 aa22.28■■□□□ 1.16
SDCBP-209ENST00000522243 CACNA1HO95180 2353 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 SHISA7A6NL88 538 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 KIAA0391O15091 583 aaKnown RBP22.27■■□□□ 1.16
SDCBP-209ENST00000522243 CLIC2O15247 247 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 HUS1O60921 280 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 HAPLN1P10915 354 aaPredicted RBP22.27■■□□□ 1.16
SDCBP-209ENST00000522243 ACAT1P24752 427 aaKnown RBP22.27■■□□□ 1.16
SDCBP-209ENST00000522243 RBP5P82980 135 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 CYP4F8P98187 520 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 TSPY1Q01534 308 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 GPR158Q5T848 1215 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 CNNM4Q6P4Q7 775 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 OSTM1Q86WC4 334 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 ARID3BQ8IVW6 561 aaPredicted RBP22.27■■□□□ 1.16
SDCBP-209ENST00000522243 GRAMD1CQ8IYS0 662 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 LRRC52Q8N7C0 313 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 C2orf15Q8WU43 125 aaKnown RBP22.27■■□□□ 1.16
SDCBP-209ENST00000522243 DEPDC1BQ8WUY9 529 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 IRF7Q92985 503 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 PI4K2AQ9BTU6 479 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 MKNK1Q9BUB5 465 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 SPATA6Q9NWH7 488 aaPredicted RBP22.27■■□□□ 1.16
SDCBP-209ENST00000522243 CFAP45Q9UL16 551 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 R4GN57 208 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 PIEZO1Q92508 2521 aa22.27■■□□□ 1.16
SDCBP-209ENST00000522243 ZNF263O14978 683 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 TGFB1I1O43294 461 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 HCRTO43612 131 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 GPR15P49685 360 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 CUL4BQ13620 913 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 TAF12Q16514 161 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 ATL3Q6DD88 541 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 ZNF852Q6ZMS4 543 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 MFSD6LQ8IWD5 586 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 STKLD1Q8NE28 680 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 CHAMP1Q96JM3 812 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 OSBPL6Q9BZF3 934 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 MAGEF1Q9HAY2 307 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 SLC39A2Q9NP94 309 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 RCOR1Q9UKL0 485 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 NDRG2Q9UN36 371 aaKnown RBP22.26■■□□□ 1.15
SDCBP-209ENST00000522243 PCDHB5Q9Y5E4 795 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 PATJQ8NI35 1801 aa22.26■■□□□ 1.15
SDCBP-209ENST00000522243 NUP210Q8TEM1 1887 aaPredicted RBP22.26■■□□□ 1.15
SDCBP-209ENST00000522243 PRPF40AO75400 957 aaKnown RBP22.25■■□□□ 1.15
SDCBP-209ENST00000522243 TNNC2P02585 160 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 SP9P0CG40 484 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 CYP2J2P51589 502 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 EHHADHQ08426 723 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 SMARCB1Q12824 385 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 SURF1Q15526 300 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 CCDC142Q17RM4 750 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 ARHGAP15Q53QZ3 475 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 SDHAF4Q5VUM1 108 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 YAF2Q8IY57 180 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 SCFD1Q8WVM8 642 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 IL21Q9HBE4 155 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 AGPAT3Q9NRZ7 376 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 GDAP2Q9NXN4 497 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 SERTAD1Q9UHV2 236 aa22.25■■□□□ 1.15
SDCBP-209ENST00000522243 R3HCC1Q9Y3T6 440 aaKnown RBP22.25■■□□□ 1.15
SDCBP-209ENST00000522243 FGF19O95750 216 aa22.24■■□□□ 1.15
SDCBP-209ENST00000522243 MYL7Q01449 175 aa22.24■■□□□ 1.15
SDCBP-209ENST00000522243 INTS6LQ5JSJ4 861 aaKnown RBP22.24■■□□□ 1.15
SDCBP-209ENST00000522243 ADGRF2Q8IZF7 708 aa22.24■■□□□ 1.15
SDCBP-209ENST00000522243 MAML2Q8IZL2 1156 aaPredicted RBP22.24■■□□□ 1.15
SDCBP-209ENST00000522243 TMEM86AQ8N2M4 240 aa22.24■■□□□ 1.15
SDCBP-209ENST00000522243 E2F7Q96AV8 911 aa22.24■■□□□ 1.15
SDCBP-209ENST00000522243 LRRC3BQ96PB8 259 aa22.24■■□□□ 1.15
SDCBP-209ENST00000522243 NELL2Q99435 816 aa22.24■■□□□ 1.15
SDCBP-209ENST00000522243 ACBD6Q9BR61 282 aa22.24■■□□□ 1.15
SDCBP-209ENST00000522243 GTF3C4Q9UKN8 822 aa22.24■■□□□ 1.15
SDCBP-209ENST00000522243 MRPS17Q9Y2R5 130 aaKnown RBP22.24■■□□□ 1.15
SDCBP-209ENST00000522243 DPYSL4O14531 572 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 NCAM2O15394 837 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 SNRNP35Q16560 246 aaKnown RBP22.23■■□□□ 1.15
SDCBP-209ENST00000522243 NFE2Q16621 373 aaPredicted RBP22.23■■□□□ 1.15
SDCBP-209ENST00000522243 DUOXA2Q1HG44 320 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 SOWAHAQ2M3V2 549 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 CEP57L1Q8IYX8 460 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 TOP6BLQ8N6T0 577 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 HPDLQ96IR7 371 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 GCNAQ96QF7 691 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 TASP1Q9H6P5 420 aa22.23■■□□□ 1.15
SDCBP-209ENST00000522243 KIAA1586Q9HCI6 787 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms