RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ADAM28Q9UKQ2 775 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 DSEQ9UL01 958 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 STXBP5LQ9Y2K9 1186 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 MICAL3Q7RTP6 2002 aa22.76■■□□□ 1.23
R3HCC1-208ENST00000522012 ARHGEF37A1IGU5 675 aa22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 ZSCAN12O43309 604 aa22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 LHX1P48742 406 aa22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 ALKBH5Q6P6C2 394 aaKnown RBP22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 MTIF3Q9H2K0 278 aaKnown RBP22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 DPEP3Q9H4B8 488 aa22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 RC3H2Q9HBD1 1191 aaKnown RBP22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 DDX43Q9NXZ2 648 aaKnown RBP22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 KIAA1257Q9ULG3 409 aa22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 PCDHB8Q9UN66 801 aa22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 PCDHA13Q9Y5I0 950 aa22.75■■□□□ 1.23
R3HCC1-208ENST00000522012 LTBP2Q14767 1821 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 FAM170AA1A519 330 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 TMCO5BA8MYB1 307 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 ESPNB1AK53 854 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 GABRDO14764 452 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 MED7O43513 233 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 GJB5O95377 273 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 VDRP11473 427 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 SCN1AP35498 2009 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 MAGEA1P43355 309 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 KIAA1328Q86T90 577 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 PALB2Q86YC2 1186 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 CCAR2Q8N163 923 aaKnown RBP22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 ZSWIM1Q9BR11 485 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 MARCH5Q9NX47 278 aa22.74■■□□□ 1.23
R3HCC1-208ENST00000522012 USP27XA6NNY8 438 aa22.73■■□□□ 1.23
R3HCC1-208ENST00000522012 CYP11A1P05108 521 aa22.73■■□□□ 1.23
R3HCC1-208ENST00000522012 CFHP08603 1231 aa22.73■■□□□ 1.23
R3HCC1-208ENST00000522012 SGO2Q562F6 1265 aa22.73■■□□□ 1.23
R3HCC1-208ENST00000522012 TNIP3Q96KP6 325 aa22.73■■□□□ 1.23
R3HCC1-208ENST00000522012 LUC7LQ9NQ29 371 aaKnown RBP22.73■■□□□ 1.23
R3HCC1-208ENST00000522012 MRPL42Q9Y6G3 142 aaKnown RBP22.73■■□□□ 1.23
R3HCC1-208ENST00000522012 CCP110O43303 1012 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 ATP2A2P16615 1042 aaKnown RBP22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 TYMPP19971 482 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 ACAT1P24752 427 aaKnown RBP22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 PASD1Q8IV76 773 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 CRYBG2Q8N1P7 616 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 C12orf29Q8N999 325 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 SLC9A7Q96T83 725 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 LPIN3Q9BQK8 851 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 TAS2R14Q9NYV8 317 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 TDRD15B5MCY1 1934 aaKnown RBP22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 TKTP29401 623 aaKnown RBP22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 PSMC1P62191 440 aaKnown RBP22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 CLEC16AQ2KHT3 1053 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 C10orf76Q5T2E6 689 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 FAM171A1Q5VUB5 890 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 OVOS1Q6IE37 1185 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 KCNT2Q6UVM3 1135 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 TRIM72Q6ZMU5 477 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 TMEM173Q86WV6 379 aaPredicted RBP22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 DNAAF5Q86Y56 855 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 HERC6Q8IVU3 1022 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 THEM5Q8N1Q8 247 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 SPATA18Q8TC71 538 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 PHOSPHO2Q8TCD6 241 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 CYFIP2Q96F07 1278 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 ZNF558Q96NG5 402 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 GPR62Q9BZJ7 368 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 FAM49BQ9NUQ9 324 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 NENFQ9UMX5 172 aa22.72■■□□□ 1.23
R3HCC1-208ENST00000522012 SF3B1O75533 1304 aaKnown RBP eCLIP22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 A0A0U1RQJ8 604 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 ATP2C2O75185 946 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 LAG3P18627 525 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 MAGEA10P43363 369 aaPredicted RBP22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 VAV2P52735 878 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 HTRA4P83105 476 aaPredicted RBP22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 CNGA2Q16280 664 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 FUT10Q6P4F1 479 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 CEP57Q86XR8 500 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 REXO1L1PQ8IX06 675 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 BCL7CQ8WUZ0 217 aaPredicted RBP22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 ATRIPQ8WXE1 791 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 PPP1R13BQ96KQ4 1090 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 KCND1Q9NSA2 647 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 PCDHGC3Q9UN70 934 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 TFR2Q9UP52 801 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 INSL6Q9Y581 213 aa22.71■■□□□ 1.23
R3HCC1-208ENST00000522012 O00370 1275 aa22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 PTPN1P18031 435 aaKnown RBP22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 PCSK1P29120 753 aa22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 YWHAHQ04917 246 aaPredicted RBP22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 ELAVL2Q12926 359 aaKnown RBP22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 NAA35Q5VZE5 725 aa22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 DENND1BQ6P3S1 775 aa22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 FIBCD1Q8N539 461 aa22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 B3GALNT2Q8NCR0 500 aa22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 CPA5Q8WXQ8 436 aa22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 SYT15Q9BQS2 421 aa22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 PACSIN1Q9BY11 444 aa22.7■■□□□ 1.22
R3HCC1-208ENST00000522012 RCCD1A6NED2 376 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 SYN3O14994 580 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 RTN2O75298 545 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms