RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 QARSP47897 775 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 USP11P51784 963 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 DGKEP52429 567 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 TRIP6Q15654 476 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 Q4G0T1 1027 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 TPGS2Q68CL5 300 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 TRIM68Q6AZZ1 485 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 B4GALNT3Q6L9W6 998 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 SLC23A3Q6PIS1 610 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 VASH1Q7L8A9 365 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 SMC5Q8IY18 1101 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 OLIG1Q8TAK6 271 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 RIN3Q8TB24 985 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 NFKBIZQ9BYH8 718 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 SMG9Q9H0W8 520 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 GKN1Q9NS71 199 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 OBP2AQ9NY56 170 aa9.78□□□□□ -0.84
TRAPPC9-212ENST00000521944 FLNCQ14315 2725 aa9.77□□□□□ -0.84
TRAPPC9-212ENST00000521944 MYO16Q9Y6X6 1858 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 CABIN1Q9Y6J0 2220 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 CYP3A7-CYP3A51PA0A087WV96 503 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 TNFRSF10BO14763 440 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 SH3BP5O60239 455 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 TDP2O95551 362 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 EDN1P05305 212 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 CYP3A7P24462 503 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 RDXP35241 583 aaKnown RBP9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 CYP4F3Q08477 520 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 NCBP1Q09161 790 aaKnown RBP9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 MXD4Q14582 209 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 RTN1Q16799 776 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 USP39Q53GS9 565 aaKnown RBP9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 GLRA4Q5JXX5 417 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 PEAR1Q5VY43 1037 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 CHD1LQ86WJ1 897 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 SYT12Q8IV01 421 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 NOSTRINQ8IVI9 506 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 TMEFF1Q8IYR6 380 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 BEST2Q8NFU1 509 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 BPIFB1Q8TDL5 484 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 TCP11Q8WWU5 503 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 RLN3Q8WXF3 142 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 NUSAP1Q9BXS6 441 aaKnown RBP9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 EBF3Q9H4W6 596 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 PDZD7Q9H5P4 517 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 PRORYQ9H606 182 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 CAPN10Q9HC96 672 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 RBM28Q9NW13 759 aaKnown RBP9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 RGL1Q9NZL6 768 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 AFF4Q9UHB7 1163 aaKnown RBP9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 PILRBQ9UKJ0 227 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 VAV3Q9UKW4 847 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 TBX20Q9UMR3 447 aa9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 RBM8AQ9Y5S9 174 aaKnown RBP9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 UBR5O95071 2799 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC9-212ENST00000521944 ANKRD17O75179 2603 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 DOPEY2Q9Y3R5 2298 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 PYCARD-AS1I3L0S3 204 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 GJB3O75712 270 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 GSPT1P15170 499 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 ARSAP15289 507 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 ITPKAP23677 461 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 CHMLP26374 656 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 ITPKBP27987 946 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 WEE1P30291 646 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 YWHABP31946 246 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 ADD1P35611 737 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 NNTQ13423 1086 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 RUNX3Q13761 415 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 ARMCX6Q7L4S7 300 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 HAUS6Q7Z4H7 955 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 C4orf19Q8IY42 314 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 EXOC8Q8IYI6 725 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 ELMOD1Q8N336 334 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 MDGA1Q8NFP4 955 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 HPS1Q92902 700 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 FZD8Q9H461 694 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 C6orf50Q9HD87 102 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 CCL26Q9Y258 94 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 YIPF1Q9Y548 306 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 PPME1Q9Y570 386 aa9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 NUP210Q8TEM1 1887 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 ATXN2Q99700 1313 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 HELZP42694 1942 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-212ENST00000521944 KIAA1549LQ6ZVL6 1849 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 TRABD2BA6NFA1 517 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 SGSM2O43147 1006 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 CBFA2T3O75081 653 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 P4HBP07237 508 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 DRD1P21728 446 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 NUCB1Q02818 461 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 PPP2R5CQ13362 524 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 CTXN3Q4LDR2 81 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 GPR158Q5T848 1215 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 EEF1DP3Q658K8 133 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 ANO7Q6IWH7 933 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 TOGARAM2Q6ZUX3 1019 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 TMPRSS7Q7RTY8 843 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 C11orf74Q86VG3 221 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms