RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 NUP62CLQ9H1M0 184 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 PCDHB5Q9Y5E4 795 aa10.14□□□□□ -0.79
CLK4-209ENST00000521621 LRG1P02750 347 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 PMS1P54277 932 aaKnown RBP10.13□□□□□ -0.79
CLK4-209ENST00000521621 NLRP12P59046 1061 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 TNNC1P63316 161 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 DLG4P78352 724 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 CEP135Q66GS9 1140 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 C4orf50Q6ZRC1 276 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 BMP8AQ7Z5Y6 402 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 OSTM1Q86WC4 334 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 E2F7Q96AV8 911 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 CCDC127Q96BQ5 260 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 DDX43Q9NXZ2 648 aaKnown RBP10.13□□□□□ -0.79
CLK4-209ENST00000521621 EHD2Q9NZN4 543 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 ARMCX3Q9UH62 379 aaPredicted RBP10.13□□□□□ -0.79
CLK4-209ENST00000521621 YIPF1Q9Y548 306 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 SNX9Q9Y5X1 595 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 COL4A2P08572 1712 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 CPB1P15086 417 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 DDX6P26196 483 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLK4-209ENST00000521621 MYL6P60660 151 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 RPL10AP62906 217 aaKnown RBP10.13□□□□□ -0.79
CLK4-209ENST00000521621 PPP3CAQ08209 521 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 ADCY1Q08828 1119 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 PTPN21Q16825 1174 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 ZNF699Q32M78 642 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 ZNF667Q5HYK9 610 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 TRIM59Q8IWR1 403 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 SMYD4Q8IYR2 804 aaPredicted RBP10.13□□□□□ -0.79
CLK4-209ENST00000521621 RDH13Q8NBN7 331 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 MYCBPAPQ8TBZ2 947 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 SLC35C1Q96A29 364 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 C8orf48Q96LL4 319 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 FAM81BQ96LP2 452 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 OBP2AQ9NY56 170 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 DNMT3BQ9UBC3 853 aaKnown RBP10.13□□□□□ -0.79
CLK4-209ENST00000521621 CDH7Q9ULB5 785 aa10.13□□□□□ -0.79
CLK4-209ENST00000521621 NCANO14594 1321 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 OBSL1O75147 1896 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 DLL1O00548 723 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 KRT19P08727 400 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 FSHRP23945 695 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 ASPAP45381 313 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 EPHB3P54753 998 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 MLLT6P55198 1093 aaPredicted RBP10.12□□□□□ -0.79
CLK4-209ENST00000521621 MTSS1LQ765P7 747 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 TMC8Q8IU68 726 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 C12orf76Q8N812 135 aaPredicted RBP10.12□□□□□ -0.79
CLK4-209ENST00000521621 FBXL13Q8NEE6 735 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 THAP9Q9H5L6 903 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 CYP4F11Q9HBI6 524 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 DENND4CQ5VZ89 1909 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 GREB1Q4ZG55 1949 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 GTPBP10A4D1E9 387 aaKnown RBP10.12□□□□□ -0.79
CLK4-209ENST00000521621 C2CD4DB7Z1M9 353 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 PRRG1O14668 218 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 GPR37L1O60883 481 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 PHACTR2O75167 634 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 RFPL2O75678 378 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 HLA-DRAP01903 254 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 PPP3CCP48454 512 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 TMC5Q6UXY8 1006 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 LRRTM3Q86VH5 581 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 RNF135Q8IUD6 432 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 TMEM130Q8N3G9 435 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 UBR7Q8N806 425 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 CCDC150Q8NCX0 1101 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 GPT2Q8TD30 523 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 TNIP3Q96KP6 325 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 C1QTNF1Q9BXJ1 281 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 UBXN6Q9BZV1 441 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 DNAJC25Q9H1X3 360 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 MAPK8IP1Q9UQF2 711 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 ATP8B3O60423 1300 aa10.12□□□□□ -0.79
CLK4-209ENST00000521621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.11□□□□□ -0.79
CLK4-209ENST00000521621 ECI2O75521 394 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 LAMP2P13473 410 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 TCF3P15923 654 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 GNL1P36915 607 aaPredicted RBP10.11□□□□□ -0.79
CLK4-209ENST00000521621 ALDH1A3P47895 512 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 NUBP1P53384 320 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 CLUL1Q15846 466 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 OVCA2Q8WZ82 227 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 EDAQ92838 391 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 ZNF512Q96ME7 567 aaPredicted RBP10.11□□□□□ -0.79
CLK4-209ENST00000521621 SYT15Q9BQS2 421 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 TTLL2Q9BWV7 592 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 IMPG2Q9BZV3 1241 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 NIF3L1Q9GZT8 377 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 SNX25Q9H3E2 840 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 CD320Q9NPF0 282 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 TRPV5Q9NQA5 729 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 IL37Q9NZH6 218 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 CEP72Q9P209 647 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 DAAM1Q9Y4D1 1078 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 ARIH1Q9Y4X5 557 aaPredicted RBP10.11□□□□□ -0.79
CLK4-209ENST00000521621 TIMM13Q9Y5L4 95 aaPredicted RBP10.11□□□□□ -0.79
CLK4-209ENST00000521621 TRIM66O15016 1216 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 DCXO43602 365 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms