RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 ADALQ6DHV7 355 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 SLFN12LQ6IEE8 588 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 PRR23CQ6ZRP0 262 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 SPPL2BQ8TCT7 592 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 RAD54LQ92698 747 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 FIZ1Q96SL8 496 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 CCSER1Q9C0I3 900 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 IL21Q9HBE4 155 aa16.09■□□□□ 0.17
PRKDC-204ENST00000521331 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.08■□□□□ 0.16
PRKDC-204ENST00000521331 ATF6P18850 670 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 PLCG1P19174 1290 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 ACOT2P49753 483 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 TNK2Q07912 1038 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 MCM6Q14566 821 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 HEATR6Q6AI08 1181 aaKnown RBP16.08■□□□□ 0.16
PRKDC-204ENST00000521331 CEP68Q76N32 757 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 WDR5BQ86VZ2 330 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 DCP1BQ8IZD4 617 aaKnown RBP16.08■□□□□ 0.16
PRKDC-204ENST00000521331 LRRC15Q8TF66 581 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 TMX3Q96JJ7 454 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 PYM1Q9BRP8 204 aaKnown RBP16.08■□□□□ 0.16
PRKDC-204ENST00000521331 ST6GALNAC4Q9H4F1 302 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 DPP3Q9NY33 737 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 AGO2Q9UKV8 859 aaKnown RBP16.08■□□□□ 0.16
PRKDC-204ENST00000521331 STYXL1Q9Y6J8 313 aa16.08■□□□□ 0.16
PRKDC-204ENST00000521331 ANKRD63C9JTQ0 380 aa16.07■□□□□ 0.16
PRKDC-204ENST00000521331 ADRB1P08588 477 aa16.07■□□□□ 0.16
PRKDC-204ENST00000521331 HAPLN1P10915 354 aaPredicted RBP16.07■□□□□ 0.16
PRKDC-204ENST00000521331 DDX6P26196 483 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRKDC-204ENST00000521331 NMT1P30419 496 aaKnown RBP16.07■□□□□ 0.16
PRKDC-204ENST00000521331 AVPR1AP37288 418 aa16.07■□□□□ 0.16
PRKDC-204ENST00000521331 SRSF5Q13243 272 aaKnown RBP16.07■□□□□ 0.16
PRKDC-204ENST00000521331 KARSQ15046 597 aaKnown RBP16.07■□□□□ 0.16
PRKDC-204ENST00000521331 NT5DC4Q86YG4 428 aa16.07■□□□□ 0.16
PRKDC-204ENST00000521331 CMTM8Q8IZV2 173 aa16.07■□□□□ 0.16
PRKDC-204ENST00000521331 LARP4BQ92615 738 aaKnown RBP16.07■□□□□ 0.16
PRKDC-204ENST00000521331 SLC46A2Q9BY10 475 aa16.07■□□□□ 0.16
PRKDC-204ENST00000521331 MYH11P35749 1972 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 CCDC163A0A0D9SF12 145 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 SOBPA7XYQ1 873 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 IL18RAPO95256 599 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 PNPLA4P41247 253 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 AMPD2Q01433 879 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 GRSF1Q12849 480 aaKnown RBP eCLIP16.06■□□□□ 0.16
PRKDC-204ENST00000521331 POSTNQ15063 836 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 SV2CQ496J9 727 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 C8orf34Q49A92 452 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 WSCD1Q658N2 575 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 LRRTM3Q86VH5 581 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 FAM160A2Q8N612 972 aaPredicted RBP16.06■□□□□ 0.16
PRKDC-204ENST00000521331 KRI1Q8N9T8 703 aaKnown RBP16.06■□□□□ 0.16
PRKDC-204ENST00000521331 GIPC2Q8TF65 315 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 DDX1Q92499 740 aaKnown RBP16.06■□□□□ 0.16
PRKDC-204ENST00000521331 HVCN1Q96D96 273 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 ZNF560Q96MR9 790 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 FAM83CQ9BQN1 747 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 SMG9Q9H0W8 520 aaKnown RBP16.06■□□□□ 0.16
PRKDC-204ENST00000521331 KIF9Q9HAQ2 790 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 GKN1Q9NS71 199 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 C2orf42Q9NWW7 574 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 ABI2Q9NYB9 513 aaPredicted RBP16.06■□□□□ 0.16
PRKDC-204ENST00000521331 PCDHB5Q9Y5E4 795 aa16.06■□□□□ 0.16
PRKDC-204ENST00000521331 KPNA7A9QM74 516 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 ATG13O75143 517 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 DDIT3P35638 169 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 TSPY1Q01534 308 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 BFSP1Q12934 665 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 RUNX3Q13761 415 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 NFE2Q16621 373 aaPredicted RBP16.05■□□□□ 0.16
PRKDC-204ENST00000521331 ZC2HC1CQ53FD0 456 aaPredicted RBP16.05■□□□□ 0.16
PRKDC-204ENST00000521331 TMEM196Q5HYL7 178 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 PPM1JQ5JR12 505 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 POMGNT1Q8WZA1 660 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 LOXL4Q96JB6 756 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 SMC3Q9UQE7 1217 aa16.05■□□□□ 0.16
PRKDC-204ENST00000521331 TISP43B9A030 160 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 TRDMT1O14717 391 aaKnown RBP16.04■□□□□ 0.16
PRKDC-204ENST00000521331 EXTL3O43909 919 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 F11P03951 625 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 CSH1P0DML2 217 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 CSH2P0DML3 217 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 HMGA1P17096 107 aaKnown RBP16.04■□□□□ 0.16
PRKDC-204ENST00000521331 NLRP12P59046 1061 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 LARP1BQ659C4 914 aaKnown RBP16.04■□□□□ 0.16
PRKDC-204ENST00000521331 CRELD2Q6UXH1 353 aaPredicted RBP16.04■□□□□ 0.16
PRKDC-204ENST00000521331 ZNF720Q7Z2F6 126 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 CACNA2D4Q7Z3S7 1137 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 TMEM150AQ86TG1 271 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 EFCAB13Q8IY85 973 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 MAB21L3Q8N8X9 362 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 GAB3Q8WWW8 586 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 MRPS31Q92665 395 aaKnown RBP16.04■□□□□ 0.16
PRKDC-204ENST00000521331 USP13Q92995 863 aaPredicted RBP16.04■□□□□ 0.16
PRKDC-204ENST00000521331 EXOC4Q96A65 974 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 HPS4Q9NQG7 708 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 TDP1Q9NUW8 608 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 SEL1LQ9UBV2 794 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 SLC8A2Q9UPR5 921 aa16.04■□□□□ 0.16
PRKDC-204ENST00000521331 EXOC7Q9UPT5 735 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms