RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
MRPS28-206ENST00000520946 NR1H3Q13133 447 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 DHX8Q14562 1220 aaKnown RBP12.44□□□□□ -0.42
MRPS28-206ENST00000520946 ZBTB6Q15916 424 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 FBXO43Q4G163 708 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 TMEM196Q5HYL7 178 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 SPATA1Q5VX52 437 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 JADE1Q6IE81 842 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 TMEM130Q8N3G9 435 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 CPA6Q8N4T0 437 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 KCTD17Q8N5Z5 321 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 C4orf32Q8N8J7 132 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 SYT2Q8N9I0 419 aaPredicted RBP12.44□□□□□ -0.42
MRPS28-206ENST00000520946 CCDC26Q8TAB7 109 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 SPPL2BQ8TCT7 592 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 HHIPQ96QV1 700 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 P2RY13Q9BPV8 354 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 EDEM2Q9BV94 578 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 LSM14BQ9BX40 385 aaKnown RBP12.44□□□□□ -0.42
MRPS28-206ENST00000520946 SLC46A2Q9BY10 475 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 KIF9Q9HAQ2 790 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 SH2B1Q9NRF2 756 aaPredicted RBP12.44□□□□□ -0.42
MRPS28-206ENST00000520946 TDP1Q9NUW8 608 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 KIF3AQ9Y496 699 aa12.44□□□□□ -0.42
MRPS28-206ENST00000520946 MAP1BP46821 2468 aaKnown RBP12.43□□□□□ -0.42
MRPS28-206ENST00000520946 TRDMT1O14717 391 aaKnown RBP12.43□□□□□ -0.42
MRPS28-206ENST00000520946 APBB3O95704 486 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 EGFP01133 1207 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 SCP2P22307 547 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 IFNAR2P48551 515 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 TAF6P49848 677 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 GALK1P51570 392 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 DGKEP52429 567 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 TSPY1Q01534 308 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 FOXC1Q12948 553 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 PDGFRLQ15198 375 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 ENOX2Q16206 610 aaKnown RBP12.43□□□□□ -0.42
MRPS28-206ENST00000520946 USP39Q53GS9 565 aaKnown RBP12.43□□□□□ -0.42
MRPS28-206ENST00000520946 C9orf57Q5W0N0 161 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 TRIM68Q6AZZ1 485 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 FSTL4Q6MZW2 842 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 KCNK18Q7Z418 384 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 ACDQ96AP0 544 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 CALML4Q96GE6 196 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 ZC3H10Q96K80 434 aaKnown RBP12.43□□□□□ -0.42
MRPS28-206ENST00000520946 ZSCAN31Q96LW9 406 aaPredicted RBP12.43□□□□□ -0.42
MRPS28-206ENST00000520946 MKNK1Q9BUB5 465 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 ZCWPW1Q9H0M4 648 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 RXFP3Q9NSD7 469 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 CIZ1Q9ULV3 898 aaPredicted RBP12.43□□□□□ -0.42
MRPS28-206ENST00000520946 TBX20Q9UMR3 447 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 PCDHB5Q9Y5E4 795 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 FRYLO94915 3013 aa12.43□□□□□ -0.42
MRPS28-206ENST00000520946 DNAH14Q0VDD8 3507 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 NPHP3-ACAD11A0A0J9YXS1 232 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 VWA3AA6NCI4 1184 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 C4orf47A7E2U8 309 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 KHNYNO15037 678 aaKnown RBP12.42□□□□□ -0.42
MRPS28-206ENST00000520946 TBCAO75347 108 aaKnown RBP12.42□□□□□ -0.42
MRPS28-206ENST00000520946 PRPF40AO75400 957 aaKnown RBP12.42□□□□□ -0.42
MRPS28-206ENST00000520946 NEFLP07196 543 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 PROS1P07225 676 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 CSH1P0DML2 217 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 CSH2P0DML3 217 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 NMT1P30419 496 aaKnown RBP12.42□□□□□ -0.42
MRPS28-206ENST00000520946 HOXC13P31276 330 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 ABCD1P33897 745 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 PLK5Q496M5 336 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 WDR44Q5JSH3 913 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 PKN3Q6P5Z2 889 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 C11orf74Q86VG3 221 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 TTC30AQ86WT1 665 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 OR10T2Q8NGX3 314 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 RPLP0P6Q8NHW5 317 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 FAM83CQ9BQN1 747 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 TRPC7Q9HCX4 862 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 DUS2Q9NX74 493 aaKnown RBP12.42□□□□□ -0.42
MRPS28-206ENST00000520946 UXTQ9UBK9 157 aaPredicted RBP12.42□□□□□ -0.42
MRPS28-206ENST00000520946 DERAQ9Y315 318 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 R3HCC1Q9Y3T6 440 aaKnown RBP12.42□□□□□ -0.42
MRPS28-206ENST00000520946 COL4A2P08572 1712 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 CACNA1GO43497 2377 aa12.42□□□□□ -0.42
MRPS28-206ENST00000520946 PPEF2O14830 753 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 TM4SF5O14894 197 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 CYP11A1P05108 521 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 NFICP08651 508 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 HAPLN1P10915 354 aaPredicted RBP12.41□□□□□ -0.42
MRPS28-206ENST00000520946 ARSAP15289 507 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 ATF6P18850 670 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 U2AF2P26368 475 aaKnown RBP eCLIP12.41□□□□□ -0.42
MRPS28-206ENST00000520946 NCKAP1LP55160 1127 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 NLRP12P59046 1061 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 RPL10AP62906 217 aaKnown RBP12.41□□□□□ -0.42
MRPS28-206ENST00000520946 DMC1Q14565 340 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 NFE2Q16621 373 aaPredicted RBP12.41□□□□□ -0.42
MRPS28-206ENST00000520946 SV2CQ496J9 727 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 RILPL1Q5EBL4 403 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 PLA2G2CQ5R387 149 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 WSCD1Q658N2 575 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 TXNDC8Q6A555 127 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms