RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 USP39Q53GS9 565 aaKnown RBP5.38□□□□□ -1.55
SDCBP-207ENST00000520168 TMEM196Q5HYL7 178 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 WDR44Q5JSH3 913 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 SPDYCQ5MJ68 293 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 LMBRD2Q68DH5 695 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-207ENST00000520168 PPP4R3AQ6IN85 833 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 KIAA1211LQ6NV74 962 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 TXNDC11Q6PKC3 985 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 APOA5Q6Q788 366 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 SYT13Q7L8C5 426 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 PRICKLE2Q7Z3G6 844 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 RAB44Q7Z6P3 723 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-207ENST00000520168 CHD1LQ86WJ1 897 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 C4orf19Q8IY42 314 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 HDDC3Q8N4P3 179 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 TMEM143Q96AN5 459 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 ZNF837Q96EG3 531 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-207ENST00000520168 TCEAL4Q96EI5 215 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 CPB2Q96IY4 423 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 SH2D3AQ9BRG2 576 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 PAAF1Q9BRP4 392 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 ADPGKQ9BRR6 497 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 OXCT2Q9BYC2 517 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-207ENST00000520168 IL25Q9H293 177 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 CYP4F11Q9HBI6 524 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 GDPD2Q9HCC8 539 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 PRMT7Q9NVM4 692 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-207ENST00000520168 C2orf42Q9NWW7 574 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 THG1LQ9NWX6 298 aaKnown RBP5.38□□□□□ -1.55
SDCBP-207ENST00000520168 GTSE1Q9NYZ3 720 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 HELZP42694 1942 aaKnown RBP5.38□□□□□ -1.55
SDCBP-207ENST00000520168 CFAP46Q8IYW2 2715 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 ABCA7Q8IZY2 2146 aa5.38□□□□□ -1.55
SDCBP-207ENST00000520168 PCDH15Q96QU1 1955 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 CYP3A7-CYP3A51PA0A087WV96 503 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 PTGESO14684 152 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 TRDMT1O14717 391 aaKnown RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 N4BP3O15049 544 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 ADAM23O75077 832 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 B3GAT3O94766 335 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 CYP3A7P24462 503 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 TKTP29401 623 aaKnown RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 YWHABP31946 246 aaKnown RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 GPC1P35052 558 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 CCR2P41597 374 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 SOX9P48436 509 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 PXNP49023 591 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 MCM2P49736 904 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 ATXN3P54252 364 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 NUCB1Q02818 461 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 PTH1RQ03431 593 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 TWF1Q12792 350 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 SEMA3BQ13214 749 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 PPP2R5CQ13362 524 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 NAB2Q15742 525 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 MAPK6Q16659 721 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 UPP1Q16831 310 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 ARHGAP15Q53QZ3 475 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 TRIM61Q5EBN2 209 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 TMCO4Q5TGY1 634 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 PLA2G4FQ68DD2 849 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 ZNF280DQ6N043 979 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 SLC23A3Q6PIS1 610 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 C19orf48Q6RUI8 117 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 APBB1IPQ7Z5R6 666 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 PIP4P1Q86T03 277 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 SMC5Q8IY18 1101 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 FAM177A1Q8N128 213 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 CEP76Q8TAP6 659 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 BPIFB1Q8TDL5 484 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 RABGGTAQ92696 567 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 FAM20AQ96MK3 541 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 ZSWIM3Q96MP5 696 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 BBC3Q96PG8 261 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 SPOCK3Q9BQ16 436 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 RWDD1Q9H446 243 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 KLK14Q9P0G3 267 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 AFF4Q9UHB7 1163 aaKnown RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 ASB3Q9Y575 518 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 RBM8AQ9Y5S9 174 aaKnown RBP5.37□□□□□ -1.55
SDCBP-207ENST00000520168 ANK1P16157 1881 aa5.37□□□□□ -1.55
SDCBP-207ENST00000520168 MYO18BQ8IUG5 2567 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 UNC79Q9P2D8 2635 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 GOLGA8AA7E2F4 631 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 GOLGA8BA8MQT2 603 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 TNFRSF10BO14763 440 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 CAPN9O14815 690 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 SGSM2O43147 1006 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 MARCH6O60337 910 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 OPHN1O60890 802 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 MOSPD3O75425 235 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 AP1G2O75843 785 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 RECQL4O94761 1208 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 PRKCBP05771 671 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 MYL4P12829 197 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 RHOQP17081 205 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 CLCNKBP51801 687 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 NPEPPSP55786 919 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 IRX4P78413 519 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 AKAP17AQ02040 695 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms