RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 KSR2Q6VAB6 950 aa7.6□□□□□ -1.19
PTPN12-213ENST00000519553 FBXO41Q8TF61 875 aa7.6□□□□□ -1.19
PTPN12-213ENST00000519553 SUCLG2Q96I99 432 aa7.6□□□□□ -1.19
PTPN12-213ENST00000519553 BTBD1Q9H0C5 482 aa7.6□□□□□ -1.19
PTPN12-213ENST00000519553 SERHL2Q9H4I8 314 aa7.6□□□□□ -1.19
PTPN12-213ENST00000519553 XPR1Q9UBH6 696 aa7.6□□□□□ -1.19
PTPN12-213ENST00000519553 KRT18P05783 430 aaKnown RBP7.59□□□□□ -1.19
PTPN12-213ENST00000519553 ZEB1P37275 1124 aaPredicted RBP7.59□□□□□ -1.19
PTPN12-213ENST00000519553 VIPR2P41587 438 aa7.59□□□□□ -1.19
PTPN12-213ENST00000519553 FMO1Q01740 532 aa7.59□□□□□ -1.19
PTPN12-213ENST00000519553 HLXQ14774 488 aaPredicted RBP7.59□□□□□ -1.19
PTPN12-213ENST00000519553 Q6ZPA2 131 aa7.59□□□□□ -1.19
PTPN12-213ENST00000519553 SESTD1Q86VW0 696 aa7.59□□□□□ -1.19
PTPN12-213ENST00000519553 MICU3Q86XE3 530 aa7.59□□□□□ -1.19
PTPN12-213ENST00000519553 CCAR1Q8IX12 1150 aaKnown RBP7.59□□□□□ -1.19
PTPN12-213ENST00000519553 COLGALT2Q8IYK4 626 aa7.59□□□□□ -1.19
PTPN12-213ENST00000519553 SLC46A1Q96NT5 459 aa7.59□□□□□ -1.19
PTPN12-213ENST00000519553 HEPHQ9BQS7 1158 aa7.59□□□□□ -1.19
PTPN12-213ENST00000519553 WDR11Q9BZH6 1224 aa7.59□□□□□ -1.19
PTPN12-213ENST00000519553 PIPSLA2A3N6 862 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 TRIM43BA6NCK2 446 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 PMM2O15305 246 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 MYL1P05976 194 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 PHKG2P15735 406 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 GATA3P23771 443 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 GCLCP48506 637 aaPredicted RBP7.58□□□□□ -1.2
PTPN12-213ENST00000519553 ZNF134P52741 427 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 FPGSQ05932 587 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 LONRF3Q496Y0 759 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 LMBRD2Q68DH5 695 aaPredicted RBP7.58□□□□□ -1.2
PTPN12-213ENST00000519553 MICALCLQ6ZW33 695 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 NOL8Q76FK4 1167 aaKnown RBP7.58□□□□□ -1.2
PTPN12-213ENST00000519553 SLC15A4Q8N697 577 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 DNAJC5GQ8N7S2 189 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 SSH3Q8TE77 659 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 SNX19Q92543 992 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 LARP4BQ92615 738 aaKnown RBP7.58□□□□□ -1.2
PTPN12-213ENST00000519553 TRIM43Q96BQ3 446 aaPredicted RBP7.58□□□□□ -1.2
PTPN12-213ENST00000519553 NMD3Q96D46 503 aaKnown RBP7.58□□□□□ -1.2
PTPN12-213ENST00000519553 TTYH3Q9C0H2 523 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 COL20A1Q9P218 1284 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 AFF4Q9UHB7 1163 aaKnown RBP7.58□□□□□ -1.2
PTPN12-213ENST00000519553 TMX2Q9Y320 296 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 RAD54BQ9Y620 910 aa7.58□□□□□ -1.2
PTPN12-213ENST00000519553 SPATA31A3Q5VYP0 1347 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 TRGV11A0A075B6L2 103 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 TMEM233B4DJY2 109 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 PQBP1O60828 265 aaKnown RBP7.57□□□□□ -1.2
PTPN12-213ENST00000519553 ADH4P08319 380 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 MCM7P33993 719 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 NPTX2P47972 431 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 NDUFV1P49821 464 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 ZXDAP98168 799 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 ABHD18Q0P651 414 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 MAP9Q49MG5 647 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 PREPLQ4J6C6 727 aaPredicted RBP7.57□□□□□ -1.2
PTPN12-213ENST00000519553 ZNF627Q7L945 461 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 FAM9AQ8IZU1 332 aaPredicted RBP7.57□□□□□ -1.2
PTPN12-213ENST00000519553 NUP62CLQ9H1M0 184 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 KIAA1586Q9HCI6 787 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 INTS13Q9NVM9 706 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 OGDHLQ9ULD0 1010 aa7.57□□□□□ -1.2
PTPN12-213ENST00000519553 ANO9A1A5B4 782 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 GRID2IPA4D2P6 1211 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 TBC1D4O60343 1298 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 FZD7O75084 574 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 SOAT2O75908 522 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 MAP4K4O95819 1239 aaPredicted RBP7.56□□□□□ -1.2
PTPN12-213ENST00000519553 ITGAMP11215 1152 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 PTPAQ15257 358 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 AMOTQ4VCS5 1084 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 C3orf38Q5JPI3 329 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 ABHD17BQ5VST6 288 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 CCDC146Q8IYE0 955 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 LNX2Q8N448 690 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 PHKBQ93100 1093 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 MSLNLQ96KJ4 702 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 ZNF518BQ9C0D4 1074 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 ZNF287Q9HBT7 754 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 SACM1LQ9NTJ5 587 aa7.56□□□□□ -1.2
PTPN12-213ENST00000519553 ATXN1LP0C7T5 689 aaKnown RBP7.55□□□□□ -1.2
PTPN12-213ENST00000519553 KRT4P19013 534 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 ITGALP20701 1170 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 ACVRL1P37023 503 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 PIK3CBP42338 1070 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 WNT3P56703 355 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 LOXL3P58215 753 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 RPS16P62249 146 aaKnown RBP7.55□□□□□ -1.2
PTPN12-213ENST00000519553 RAB32Q13637 225 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 DCAF12L1Q5VU92 463 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 Q6YL49 198 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 VRK3Q8IV63 474 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 FAM109AQ8N4B1 249 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 OR56A3Q8NH54 315 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 OSBPL9Q96SU4 736 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 MESP1Q9BRJ9 268 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 NAA15Q9BXJ9 866 aaKnown RBP7.55□□□□□ -1.2
PTPN12-213ENST00000519553 PCGF6Q9BYE7 350 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 TBCCD1Q9NVR7 557 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 SYBUQ9NX95 663 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms