RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 EFCAB13Q8IY85 973 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 DCLK2Q8N568 766 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 BPIFB1Q8TDL5 484 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 GIPC2Q8TF65 315 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 NOC3LQ8WTT2 800 aaKnown RBP11.72□□□□□ -0.53
PVT1-208ENST00000519481 INTS4Q96HW7 963 aaKnown RBP11.72□□□□□ -0.53
PVT1-208ENST00000519481 LPIN3Q9BQK8 851 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 LRRC27Q9C0I9 530 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 EPC1Q9H2F5 836 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 ZSCAN16Q9H4T2 348 aaPredicted RBP11.72□□□□□ -0.53
PVT1-208ENST00000519481 TMEM206Q9H813 350 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 OLFML3Q9NRN5 406 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 RBAKQ9NYW8 714 aaPredicted RBP11.72□□□□□ -0.53
PVT1-208ENST00000519481 GMEB2Q9UKD1 530 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 AGAP1Q9UPQ3 857 aa11.72□□□□□ -0.53
PVT1-208ENST00000519481 SMG5Q9UPR3 1016 aaKnown RBP11.72□□□□□ -0.53
PVT1-208ENST00000519481 COL4A3Q01955 1670 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 GPR179Q6PRD1 2367 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 SHISA7A6NL88 538 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 SLC38A8A6NNN8 435 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 KIAA0391O15091 583 aaKnown RBP11.71□□□□□ -0.53
PVT1-208ENST00000519481 LILRB5O75023 590 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 HAPLN1P10915 354 aaPredicted RBP11.71□□□□□ -0.53
PVT1-208ENST00000519481 CHRNB1P11230 501 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 DDX6P26196 483 aaKnown RBP eCLIP11.71□□□□□ -0.53
PVT1-208ENST00000519481 WEE1P30291 646 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 ADSSP30520 456 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 POLR2BP30876 1174 aaKnown RBP11.71□□□□□ -0.53
PVT1-208ENST00000519481 CYP4F8P98187 520 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 MYL7Q01449 175 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 DGKKQ5KSL6 1271 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 FAM173BQ6P4H8 233 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 CRELD2Q6UXH1 353 aaPredicted RBP11.71□□□□□ -0.53
PVT1-208ENST00000519481 DGLUCYQ7Z3D6 616 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 GPIHBP1Q8IV16 184 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 ZNF687Q8N1G0 1237 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 TMEM86AQ8N2M4 240 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 NELL1Q92832 810 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 DNAJC19Q96DA6 116 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 RMDN1Q96DB5 314 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 RSPRY1Q96DX4 576 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 SAAL1Q96ER3 474 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 STRA6Q9BX79 667 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 PANK2Q9BZ23 570 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 PANK4Q9NVE7 773 aa11.71□□□□□ -0.53
PVT1-208ENST00000519481 PATJQ8NI35 1801 aa11.71□□□□□ -0.54
PVT1-208ENST00000519481 MYBPHLA2RUH7 354 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 SPECC1L-ADORA2AF8WAN1 911 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 ARNTLO00327 626 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 EXTL3O43909 919 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 PRPF40AO75400 957 aaKnown RBP11.7□□□□□ -0.54
PVT1-208ENST00000519481 ITGB3P05106 788 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 KRT19P08727 400 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 TMEM191BP0C7N4 346 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 CSH1P0DML2 217 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 CSH2P0DML3 217 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 ATF6P18850 670 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 CTHP32929 405 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 AVPR1AP37288 418 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 RPL10AP62906 217 aaKnown RBP11.7□□□□□ -0.54
PVT1-208ENST00000519481 KCNA1Q09470 495 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 BFSP1Q12934 665 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 SLC39A14Q15043 492 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 STK38Q15208 465 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 LRRTM3Q86VH5 581 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 SPEM1Q8N4L4 309 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 CSGALNACT2Q8N6G5 542 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 CELF5Q8N6W0 485 aaKnown RBP11.7□□□□□ -0.54
PVT1-208ENST00000519481 LRRC52Q8N7C0 313 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 MRPS31Q92665 395 aaKnown RBP11.7□□□□□ -0.54
PVT1-208ENST00000519481 ANKRD36BP1Q96IX9 119 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 USP28Q96RU2 1077 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 MKNK1Q9BUB5 465 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 IKZF4Q9H2S9 585 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 DDX43Q9NXZ2 648 aaKnown RBP11.7□□□□□ -0.54
PVT1-208ENST00000519481 UXTQ9UBK9 157 aaPredicted RBP11.7□□□□□ -0.54
PVT1-208ENST00000519481 ITGA11Q9UKX5 1188 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 USP18Q9UMW8 372 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 MORC2Q9Y6X9 1032 aaPredicted RBP11.7□□□□□ -0.54
PVT1-208ENST00000519481 SCN1AP35498 2009 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 TICRRQ7Z2Z1 1910 aa11.7□□□□□ -0.54
PVT1-208ENST00000519481 NCANO14594 1321 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 GOLGA8IPA6NC78 632 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 GOLGA8JA6NMD2 632 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 PCSK1P29120 753 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 SOX9P48436 509 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 LHX1P48742 406 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 CDR1P51861 262 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 RBP5P82980 135 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 AMPD3Q01432 767 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 AMPD2Q01433 879 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 MYO1EQ12965 1108 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 SURF1Q15526 300 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 ITPRIPL2Q3MIP1 535 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 CC2D1AQ6P1N0 951 aaPredicted RBP11.69□□□□□ -0.54
PVT1-208ENST00000519481 CMTM8Q8IZV2 173 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 GPD1LQ8N335 351 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 SYNPOQ8N3V7 929 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
PVT1-208ENST00000519481 PDILTQ8N807 584 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms