RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 NR1D1P20393 614 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 IVDP26440 423 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 POLR2BP30876 1174 aaKnown RBP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 HOXA11P31270 313 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 GRM5P41594 1212 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 EIF3BP55884 814 aaKnown RBP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 PTPN11Q06124 597 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 SNX1Q13596 522 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 PPP1R7Q15435 360 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 CYP4A22Q5TCH4 519 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 AGBL2Q5U5Z8 902 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 DCUN1D2Q6PH85 259 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 RCOR2Q8IZ40 523 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 ATL2Q8NHH9 583 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 GRK7Q8WTQ7 553 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 TMEM176AQ96HP8 235 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 HPDLQ96IR7 371 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 HEMGNQ9BXL5 484 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 ELOVL4Q9GZR5 314 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 FAM124BQ9H5Z6 455 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 SETD4Q9NVD3 440 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 SLC5A4Q9NY91 659 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 HMGXB4Q9UGU5 601 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 SIGLEC16A6NMB1 481 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 GPR32O75388 356 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 RARGP13631 454 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 P4HA1P13674 534 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 RBP5P82980 135 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 INCA1Q0VD86 236 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 DCAF4L1Q3SXM0 396 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 ATP13A4Q4VNC1 1196 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 DNAJC21Q5F1R6 531 aaKnown RBP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 RHBDF2Q6PJF5 856 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 ZNF784Q8NCA9 323 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 KAT2BQ92831 832 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 RBM41Q96IZ5 413 aaKnown RBP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 SCLT1Q96NL6 688 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 SLITRK1Q96PX8 696 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 DPP3Q9NY33 737 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPIDR-210ENST00000519362 AGAP1Q9UPQ3 857 aa13.09□□□□□ -0.31
SPIDR-210ENST00000519362 NRCAMQ92823 1304 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 MBLAC1A4D2B0 266 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-210ENST00000519362 EIF3HO15372 352 aaKnown RBP eCLIP13.08□□□□□ -0.323e-7■□□□□ 10.4
SPIDR-210ENST00000519362 ITGBL1O95965 494 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-210ENST00000519362 IVLP07476 585 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 ITIH2P19823 946 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 FGFR4P22455 802 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 PTPN7P35236 360 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 SSR1P43307 286 aaKnown RBP13.08□□□□□ -0.32
SPIDR-210ENST00000519362 CDC42EP1Q00587 391 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 ADCY2Q08462 1091 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 ORC1Q13415 861 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 SLMAPQ14BN4 828 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 KIZQ2M2Z5 673 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 CST9Q5W186 159 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 FNIP1Q8TF40 1166 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 CPXM1Q96SM3 734 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 LRRC4CQ9HCJ2 640 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 CALCOCO1Q9P1Z2 691 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 TJP2Q9UDY2 1190 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 CPA4Q9UI42 421 aa13.08□□□□□ -0.32
SPIDR-210ENST00000519362 DYNC1LI2O43237 492 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-210ENST00000519362 MICAL2O94851 1124 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 GAS8O95995 478 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 HMGCRP04035 888 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 SMIM10L2AP0DMW4 78 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 SMIM10L2BP0DMW5 78 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 VDRP11473 427 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 KRT3P12035 628 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 RFC1P35251 1148 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-210ENST00000519362 GJC1P36383 396 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 GPD2P43304 727 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 GABRB2P47870 512 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 ATP1A2P50993 1020 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 COPS2P61201 443 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 GNGT1P63211 74 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 CALCOCO2Q13137 446 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 MAP2K5Q13163 448 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 PCBP1Q15365 356 aaKnown RBP eCLIP13.07□□□□□ -0.32
SPIDR-210ENST00000519362 CNGA2Q16280 664 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 PRAMEF19Q5SWL8 479 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 TXNRD3NBQ6F5E7 133 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 POLNQ7Z5Q5 900 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 XYLT1Q86Y38 959 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 SNF8Q96H20 258 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 SEMA4AQ9H3S1 761 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 PLEKHA5Q9HAU0 1116 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 AAASQ9NRG9 546 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 KLHL11Q9NVR0 708 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 FLRT1Q9NZU1 646 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 WDR35Q9P2L0 1181 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 BARX2Q9UMQ3 279 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-210ENST00000519362 DERAQ9Y315 318 aa13.07□□□□□ -0.32
SPIDR-210ENST00000519362 SMIM35A0A1B0GVV1 85 aa13.06□□□□□ -0.32
SPIDR-210ENST00000519362 SHBGP04278 402 aa13.06□□□□□ -0.32
SPIDR-210ENST00000519362 ERBB2P04626 1255 aa13.06□□□□□ -0.32
SPIDR-210ENST00000519362 ZNF865P0CJ78 1059 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms