RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.67□□□□□ -1.82
PCM1-208ENST00000518877 PRSS3P2Q8NHM4 247 aa3.67□□□□□ -1.82
PCM1-208ENST00000518877 ATRIPQ8WXE1 791 aa3.67□□□□□ -1.82
PCM1-208ENST00000518877 TBC1D5Q92609 795 aa3.67□□□□□ -1.82
PCM1-208ENST00000518877 MRGPRX4Q96LA9 322 aa3.67□□□□□ -1.82
PCM1-208ENST00000518877 FAM126AQ9BYI3 521 aaPredicted RBP3.67□□□□□ -1.82
PCM1-208ENST00000518877 IPPQ9Y573 584 aa3.67□□□□□ -1.82
PCM1-208ENST00000518877 WASHC2AQ641Q2 1341 aa3.67□□□□□ -1.82
PCM1-208ENST00000518877 E9PLN8 166 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 QSOX1O00391 747 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 NDUFS2O75306 463 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 LPOP22079 712 aaPredicted RBP3.66□□□□□ -1.82
PCM1-208ENST00000518877 ALDH9A1P49189 494 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 ZNF134P52741 427 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 IL10RAQ13651 578 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 MIS18BP1Q6P0N0 1132 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 MIGA2Q7L4E1 593 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 KRT73Q86Y46 540 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 CBARPQ8N350 705 aaPredicted RBP3.66□□□□□ -1.82
PCM1-208ENST00000518877 PNLDC1Q8NA58 520 aaKnown RBP3.66□□□□□ -1.82
PCM1-208ENST00000518877 POC1BQ8TC44 478 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 JADE3Q92613 823 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 VKORC1Q9BQB6 163 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 AMBRA1Q9C0C7 1298 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 TRNAU1APQ9NX07 287 aaKnown RBP3.66□□□□□ -1.82
PCM1-208ENST00000518877 LIMCH1Q9UPQ0 1083 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.66□□□□□ -1.82
PCM1-208ENST00000518877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.66□□□□□ -1.82
PCM1-208ENST00000518877 SPATA31A3Q5VYP0 1347 aa3.66□□□□□ -1.82
PCM1-208ENST00000518877 PRR23D1E9PI22 279 aaPredicted RBP3.65□□□□□ -1.83
PCM1-208ENST00000518877 SOCS2O14508 198 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 HTRA2O43464 458 aaPredicted RBP3.65□□□□□ -1.83
PCM1-208ENST00000518877 SGTAO43765 313 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 PRR23D2P0DMB1 279 aaPredicted RBP3.65□□□□□ -1.83
PCM1-208ENST00000518877 JUPP14923 745 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 C5AR1P21730 350 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 SCP2P22307 547 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 TLE1Q04724 770 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 RAB39AQ14964 217 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 AARS2Q5JTZ9 985 aaKnown RBP3.65□□□□□ -1.83
PCM1-208ENST00000518877 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 TEDDM1Q5T9Z0 273 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 KIAA1161Q6NSJ0 714 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 ANKRD16Q6P6B7 361 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 GIMAP6Q6P9H5 292 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 CATSPERGQ6ZRH7 1159 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 AMOTL1Q8IY63 956 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 GALNT16Q8N428 558 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 NANOGP1Q8N7R0 232 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 SMRP1Q8NCR6 262 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 KLHDC4Q8TBB5 520 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 NSMCE1Q8WV22 266 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 HDAC10Q969S8 669 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 C5orf34Q96MH7 638 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 OSBPL9Q96SU4 736 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 TMEM79Q9BSE2 394 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 PDGFCQ9NRA1 345 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 SAP30BPQ9UHR5 308 aaKnown RBP3.65□□□□□ -1.83
PCM1-208ENST00000518877 AFG3L2Q9Y4W6 797 aa3.65□□□□□ -1.83
PCM1-208ENST00000518877 PRSS29PA6NIE9 313 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 H0YIZ8 118 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 MYO1FO00160 1098 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 ZNF213O14771 459 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 PCDHGA12O60330 932 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 ANXA1P04083 346 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 ITGALP20701 1170 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 PCSK6P29122 969 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 EEFSECP57772 596 aaKnown RBP3.64□□□□□ -1.83
PCM1-208ENST00000518877 CLUL1Q15846 466 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 C3orf36Q3SXR2 165 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 Q4G0T1 1027 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 PCID2Q5JVF3 399 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 RBM20Q5T481 1227 aaKnown RBP3.64□□□□□ -1.83
PCM1-208ENST00000518877 SDE2Q6IQ49 451 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 GADL1Q6ZQY3 521 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 C1orf162Q8NEQ5 155 aaPredicted RBP3.64□□□□□ -1.83
PCM1-208ENST00000518877 FAM136AQ96C01 138 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 CLPTM1LQ96KA5 538 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 CALCOCO1Q9P1Z2 691 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 USP35Q9P2H5 1018 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.64□□□□□ -1.83
PCM1-208ENST00000518877 PCDHGA9Q9Y5G4 932 aaKnown RBP3.64□□□□□ -1.83
PCM1-208ENST00000518877 PCDHGA8Q9Y5G5 932 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 PCDHGA7Q9Y5G6 932 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 PCDHGA6Q9Y5G7 932 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 PCDHGA3Q9Y5H0 932 aa3.64□□□□□ -1.83
PCM1-208ENST00000518877 CYP2D7A0A087X1C5 515 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 CCDC154A6NI56 674 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 CHRM3P20309 590 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 CD6P30203 668 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 CYP2C18P33260 490 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 PSMC1P62191 440 aaKnown RBP3.63□□□□□ -1.83
PCM1-208ENST00000518877 ZNF618Q5T7W0 954 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 PGM2L1Q6PCE3 622 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 NAPRTQ6XQN6 538 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 MRPL10Q7Z7H8 261 aaKnown RBP3.63□□□□□ -1.83
PCM1-208ENST00000518877 CHSY1Q86X52 802 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 CNTD1Q8N815 330 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 PSD4Q8NDX1 1056 aa3.63□□□□□ -1.83
PCM1-208ENST00000518877 ATL2Q8NHH9 583 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms