RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 GOLGA8SH3BPF8 625 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 M0QYV0 167 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 TNPO2O14787 897 aaKnown RBP11.4□□□□□ -0.58
SPIDR-204ENST00000517824 MYCP01106 439 aaPredicted RBP11.4□□□□□ -0.58
SPIDR-204ENST00000517824 MYZAPP0CAP1 466 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 PYGMP11217 842 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 HOXD8P13378 290 aaPredicted RBP11.4□□□□□ -0.58
SPIDR-204ENST00000517824 CAPN2P17655 700 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 MMP8P22894 467 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 EIF4BP23588 611 aaKnown RBP11.4□□□□□ -0.58
SPIDR-204ENST00000517824 CTGFP29279 349 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 RAP1GAPP47736 663 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 PSEN2P49810 448 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 LMNB2Q03252 620 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 PTP4A2Q12974 167 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 PIGHQ14442 188 aaPredicted RBP11.4□□□□□ -0.58
SPIDR-204ENST00000517824 ARHGEF6Q15052 776 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 SLC27A1Q6PCB7 646 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 C17orf99Q6UX52 265 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 RUFY4Q6ZNE9 571 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 CEP128Q6ZU80 1094 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 ZNF365Q70YC5 407 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 DPH6Q7L8W6 267 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 HOOK3Q86VS8 718 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 KATNAL2Q8IYT4 538 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 LINC01465Q8N7H1 131 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 UBR7Q8N806 425 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 C12orf50Q8NA57 414 aaPredicted RBP11.4□□□□□ -0.58
SPIDR-204ENST00000517824 TSEN2Q8NCE0 465 aaKnown RBP11.4□□□□□ -0.58
SPIDR-204ENST00000517824 NPLOC4Q8TAT6 608 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 C18orf8Q96DM3 657 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 ZNF560Q96MR9 790 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 ZIM3Q96PE6 472 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 MCEEQ96PE7 176 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 SETD4Q9NVD3 440 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 DPP3Q9NY33 737 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 DDX56Q9NY93 547 aaKnown RBP11.4□□□□□ -0.58
SPIDR-204ENST00000517824 PSD3Q9NYI0 1048 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 CWC15Q9P013 229 aaKnown RBP11.4□□□□□ -0.58
SPIDR-204ENST00000517824 PCYOX1Q9UHG3 505 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 ADAM21Q9UKJ8 722 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 AGAP1Q9UPQ3 857 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 PLAAQ9Y263 795 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 DERAQ9Y315 318 aa11.4□□□□□ -0.58
SPIDR-204ENST00000517824 SMIM35A0A1B0GVV1 85 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 NDC80O14777 642 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 CSDE1O75534 798 aaKnown RBP11.39□□□□□ -0.59
SPIDR-204ENST00000517824 CST3P01034 146 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-204ENST00000517824 FAM153BP0C7A2 387 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 ATF2P15336 505 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 PSMA2P25787 234 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 AXLP30530 894 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 COILP38432 576 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-204ENST00000517824 PEX5P50542 639 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 PSMC1P62191 440 aaKnown RBP11.39□□□□□ -0.59
SPIDR-204ENST00000517824 KRT17Q04695 432 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 PTPN11Q06124 597 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-204ENST00000517824 DHX9Q08211 1270 aaKnown RBP11.39□□□□□ -0.59
SPIDR-204ENST00000517824 MAMLD1Q13495 774 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 STILQ15468 1287 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
SPIDR-204ENST00000517824 KIZQ2M2Z5 673 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 FAM153CQ494X1 144 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 CEP85LQ5SZL2 805 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 DENND2CQ68D51 928 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 PLEKHA7Q6IQ23 1121 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 GSTA5Q7RTV2 222 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 CROCCP2Q86T23 111 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 DDX42Q86XP3 938 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPIDR-204ENST00000517824 HACE1Q8IYU2 909 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 ARFGAP2Q8N6H7 521 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 C1orf127Q8N9H9 656 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 BBOF1Q8ND07 529 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 C3orf20Q8ND61 904 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 EXD1Q8NHP7 514 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 BCO2Q9BYV7 579 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 SMYD3Q9H7B4 428 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 PLEKHA5Q9HAU0 1116 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 ERVK-5Q9HDB9 667 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 FAM153AQ9UHL3 310 aa11.39□□□□□ -0.59
SPIDR-204ENST00000517824 C17orf102A2RUQ5 167 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 A6NNZ2 444 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 HMGB1P1B2RPK0 211 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-204ENST00000517824 SYF2O95926 243 aaKnown RBP11.38□□□□□ -0.59
SPIDR-204ENST00000517824 F2P00734 622 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 VDRP11473 427 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 CYP2B6P20813 491 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 EIF3BP55884 814 aaKnown RBP11.38□□□□□ -0.59
SPIDR-204ENST00000517824 TMEM62Q0P6H9 643 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 SNX1Q13596 522 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 SLMAPQ14BN4 828 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 AMHR2Q16671 573 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 CYP1B1Q16678 543 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 TUBB8Q3ZCM7 444 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 C2CD6Q53TS8 623 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 SPDYCQ5MJ68 293 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 MORN1Q5T089 497 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 CYP4A22Q5TCH4 519 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 OLFML2BQ68BL8 750 aa11.38□□□□□ -0.59
SPIDR-204ENST00000517824 AADACL2Q6P093 401 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms