RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CYTH4Q9UIA0 394 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 BARX2Q9UMQ3 279 aaPredicted RBP28.11■■■□□ 2.09
COL13A1-210ENST00000517713 HES2Q9Y543 173 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 O00370 1275 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 PODXLO00592 558 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 OPA1O60313 960 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 FNTAP49354 379 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 INCA1Q0VD86 236 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 PTPN20Q4JDL3 420 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 CCDC105Q8IYK2 499 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 TTC39CQ8N584 583 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 TMEM40Q8WWA1 233 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 LRRC45Q96CN5 670 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 SH3GL2Q99962 352 aa28.11■■■□□ 2.09
COL13A1-210ENST00000517713 VDRP11473 427 aa28.1■■■□□ 2.09
COL13A1-210ENST00000517713 GNAT1P11488 350 aa28.1■■■□□ 2.09
COL13A1-210ENST00000517713 DRG2P55039 364 aaKnown RBP28.1■■■□□ 2.09
COL13A1-210ENST00000517713 C7orf31Q8N865 590 aa28.1■■■□□ 2.09
COL13A1-210ENST00000517713 HEXIM2Q96MH2 286 aaKnown RBP28.1■■■□□ 2.09
COL13A1-210ENST00000517713 ZNF252P-AS1Q0IIN9 211 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 ZBTB6Q15916 424 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 SGO2Q562F6 1265 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 CCDC50Q8IVM0 306 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 GOLGA6L1Q8N7Z2 621 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 TRPV1Q8NER1 839 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 PIK3R5Q8WYR1 880 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 NXF3Q9H4D5 531 aaKnown RBP28.09■■■□□ 2.09
COL13A1-210ENST00000517713 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.09■■■□□ 2.09
COL13A1-210ENST00000517713 PIN4Q9Y237 131 aaKnown RBP28.09■■■□□ 2.09
COL13A1-210ENST00000517713 DUSP11O75319 330 aaKnown RBP28.09■■■□□ 2.09
COL13A1-210ENST00000517713 MICAL2O94851 1124 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 NDST1P52848 882 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 CNGA2Q16280 664 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 ALKAL1Q6UXT8 129 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 NME8Q8N427 588 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 BEST2Q8NFU1 509 aa28.09■■■□□ 2.09
COL13A1-210ENST00000517713 HOXC8P31273 242 aa28.08■■■□□ 2.09
COL13A1-210ENST00000517713 GJC1P36383 396 aa28.08■■■□□ 2.09
COL13A1-210ENST00000517713 TM4SF4P48230 202 aa28.08■■■□□ 2.09
COL13A1-210ENST00000517713 CRYBB1P53674 252 aaPredicted RBP28.08■■■□□ 2.09
COL13A1-210ENST00000517713 OGDHQ02218 1023 aa28.08■■■□□ 2.09
COL13A1-210ENST00000517713 PIGHQ14442 188 aaPredicted RBP28.08■■■□□ 2.09
COL13A1-210ENST00000517713 EXD1Q8NHP7 514 aa28.08■■■□□ 2.09
COL13A1-210ENST00000517713 CNTN3Q9P232 1028 aa28.08■■■□□ 2.09
COL13A1-210ENST00000517713 CA12O43570 354 aa28.08■■■□□ 2.08
COL13A1-210ENST00000517713 RECQL4O94761 1208 aa28.08■■■□□ 2.08
COL13A1-210ENST00000517713 HMGCRP04035 888 aa28.08■■■□□ 2.08
COL13A1-210ENST00000517713 FLT3P36888 993 aa28.08■■■□□ 2.08
COL13A1-210ENST00000517713 KCNJ1P48048 391 aa28.08■■■□□ 2.08
COL13A1-210ENST00000517713 C1orf54Q8WWF1 131 aa28.08■■■□□ 2.08
COL13A1-210ENST00000517713 HERPUD2Q9BSE4 406 aa28.08■■■□□ 2.08
COL13A1-210ENST00000517713 TUBGCP4Q9UGJ1 667 aa28.08■■■□□ 2.08
COL13A1-210ENST00000517713 SNX24Q9Y343 169 aa28.08■■■□□ 2.08
COL13A1-210ENST00000517713 TRIP12Q14669 1992 aaPredicted RBP28.07■■■□□ 2.08
COL13A1-210ENST00000517713 TRIP11Q15643 1979 aa28.07■■■□□ 2.08
COL13A1-210ENST00000517713 F8VP50 259 aa28.07■■■□□ 2.08
COL13A1-210ENST00000517713 C6orf222P0C671 652 aaPredicted RBP28.07■■■□□ 2.08
COL13A1-210ENST00000517713 EXOC4Q96A65 974 aa28.07■■■□□ 2.08
COL13A1-210ENST00000517713 CPXM1Q96SM3 734 aa28.07■■■□□ 2.08
COL13A1-210ENST00000517713 APOL6Q9BWW8 343 aa28.07■■■□□ 2.08
COL13A1-210ENST00000517713 TJP2Q9UDY2 1190 aa28.07■■■□□ 2.08
COL13A1-210ENST00000517713 KIAA1257Q9ULG3 409 aa28.07■■■□□ 2.08
COL13A1-210ENST00000517713 MYADML2A6NDP7 307 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 SIGLEC16A6NMB1 481 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 GOLGA8KD6RF30 607 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 GOLGA8SH3BPF8 625 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 M0QYV0 167 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 RALAP11233 206 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 PSMC1P62191 440 aaKnown RBP28.06■■■□□ 2.08
COL13A1-210ENST00000517713 DMTNQ08495 405 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 NIPA2Q8N8Q9 360 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 C18orf25Q96B23 403 aaPredicted RBP28.06■■■□□ 2.08
COL13A1-210ENST00000517713 FMO2Q99518 471 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 NT5C1AQ9BXI3 368 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 SYNCQ9H7C4 482 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 FAM204AQ9H8W3 233 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 ZDHHC18Q9NUE0 388 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 WDR35Q9P2L0 1181 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 KPNA6O60684 536 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 KRT3P12035 628 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 AKAP5P24588 427 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 HSD17B3P37058 310 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 GLRA4Q5JXX5 417 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 ZIC5Q96T25 663 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 HEMGNQ9BXL5 484 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 ABT1Q9ULW3 272 aaKnown RBP28.06■■■□□ 2.08
COL13A1-210ENST00000517713 PTPN22Q9Y2R2 807 aa28.06■■■□□ 2.08
COL13A1-210ENST00000517713 PPEF2O14830 753 aa28.05■■■□□ 2.08
COL13A1-210ENST00000517713 ECEL1O95672 775 aa28.05■■■□□ 2.08
COL13A1-210ENST00000517713 FCGRTP55899 365 aa28.05■■■□□ 2.08
COL13A1-210ENST00000517713 GSCP56915 257 aaPredicted RBP28.05■■■□□ 2.08
COL13A1-210ENST00000517713 LRRC38Q5VT99 294 aa28.05■■■□□ 2.08
COL13A1-210ENST00000517713 LRRC52Q8N7C0 313 aa28.05■■■□□ 2.08
COL13A1-210ENST00000517713 SLCO2A1Q92959 643 aa28.05■■■□□ 2.08
COL13A1-210ENST00000517713 OSBPL8Q9BZF1 889 aa28.05■■■□□ 2.08
COL13A1-210ENST00000517713 SNX9Q9Y5X1 595 aa28.05■■■□□ 2.08
COL13A1-210ENST00000517713 ERBB2P04626 1255 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 TCF4P15884 667 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 GBP1P32455 592 aa28.04■■■□□ 2.08
COL13A1-210ENST00000517713 CETN2P41208 172 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms