RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ATG2BQ96BY7 2078 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 TTC26A0AVF1 554 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 GIPC1O14908 333 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 KHNYNO15037 678 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 SLC16A4O15374 487 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 SOAT2O75908 522 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 EGFP01133 1207 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 CLTAP09496 248 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 GBP1P32455 592 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 MATR3P43243 847 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 FOSBP53539 338 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 SMARCB1Q12824 385 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 PDGFRLQ15198 375 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 ZNF174Q15697 407 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 ZBTB6Q15916 424 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 SEZ6Q53EL9 994 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 TTC9BQ8N6N2 239 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 NECAB1Q8N987 351 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 SNX29Q8TEQ0 813 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 SPIRE2Q8WWL2 714 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 CHFRQ96EP1 664 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 P2RY13Q9BPV8 354 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 LPIN3Q9BQK8 851 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 SLC46A2Q9BY10 475 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 EBF3Q9H4W6 596 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 IL21Q9HBE4 155 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 TCHHQ07283 1943 aa12.43□□□□□ -0.42
TRAPPC9-203ENST00000517667 SRRM3A6NNA2 597 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 H0YCG3 227 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 HOXB3P14651 431 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 ATF6P18850 670 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 TRAPPC10P48553 1259 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 LILRA4P59901 499 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 ANAPC15P60006 121 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 SPAG1Q07617 926 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 MAPK7Q13164 816 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 ME3Q16798 604 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 MGAT5BQ3V5L5 792 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 SLC39A12Q504Y0 691 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 TTC38Q5R3I4 469 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 PMS2CLQ68D20 193 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 TRIM68Q6AZZ1 485 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 RINT1Q6NUQ1 792 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 CPA6Q8N4T0 437 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 IGSF22Q8N9C0 903 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 RPLP0P6Q8NHW5 317 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 SPPL2BQ8TCT7 592 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 ZCCHC14Q8WYQ9 949 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 GATA6Q92908 595 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 RUSC1Q9BVN2 902 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 SCNM1Q9BWG6 230 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 SMG9Q9H0W8 520 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 TDP1Q9NUW8 608 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 DSEQ9UL01 958 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 NBEAQ8NFP9 2946 aa12.42□□□□□ -0.42
TRAPPC9-203ENST00000517667 THADAQ6YHU6 1953 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 OTOL1A6NHN0 477 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 E9PMD0 336 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 DCLK1O15075 740 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 MAPTP10636 758 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 PLS3P13797 630 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 GUCY2CP25092 1073 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 GALK1P51570 392 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 DMC1Q14565 340 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 ZNF268Q14587 947 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 USP39Q53GS9 565 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 KRT79Q5XKE5 535 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 C1orf186Q6ZWK4 172 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 CYP2U1Q7Z449 544 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 CD302Q8IX05 232 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 MAB21L3Q8N8X9 362 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 TMEM161BQ8NDZ6 487 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 TSTD1Q8NFU3 115 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 OR10T2Q8NGX3 314 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 BICD1Q96G01 975 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 SENP8Q96LD8 212 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 ZCWPW1Q9H0M4 648 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 FOXP1Q9H334 677 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 TBX20Q9UMR3 447 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 CCL26Q9Y258 94 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 NEUROG3Q9Y4Z2 214 aa12.41□□□□□ -0.42
TRAPPC9-203ENST00000517667 JAK2O60674 1132 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 CYP11A1P05108 521 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 SPINK2P20155 84 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 SCP2P22307 547 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 GJA4P35212 333 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 DGKEP52429 567 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 NLRP12P59046 1061 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 LMAN2Q12907 356 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 GNL2Q13823 731 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 SPATA1Q5VX52 437 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 LRSAM1Q6UWE0 723 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 METTL23Q86XA0 190 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 THEM5Q8N1Q8 247 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 MRPS31Q92665 395 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 CD101Q93033 1021 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 ATP2A3Q93084 1043 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 SLC32A1Q9H598 525 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 FBRSL1Q9HCM7 1045 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms