RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 CNTNAP3Q9BZ76 1288 aa9.04□□□□□ -0.96
CTNNA1-203ENST00000517534 IKZF4Q9H2S9 585 aa9.04□□□□□ -0.96
CTNNA1-203ENST00000517534 ST6GALNAC4Q9H4F1 302 aa9.04□□□□□ -0.96
CTNNA1-203ENST00000517534 ASB7Q9H672 318 aa9.04□□□□□ -0.96
CTNNA1-203ENST00000517534 GMEB2Q9UKD1 530 aa9.04□□□□□ -0.96
CTNNA1-203ENST00000517534 USP18Q9UMW8 372 aa9.04□□□□□ -0.96
CTNNA1-203ENST00000517534 DERAQ9Y315 318 aa9.04□□□□□ -0.96
CTNNA1-203ENST00000517534 KIF3AQ9Y496 699 aa9.04□□□□□ -0.96
CTNNA1-203ENST00000517534 SDK1Q7Z5N4 2213 aa9.04□□□□□ -0.96
CTNNA1-203ENST00000517534 COL4A2P08572 1712 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 H3BQV1 296 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 CYB561D2O14569 222 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 LRP3O75074 770 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 FGF19O95750 216 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 F11P03951 625 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 HMGA1P17096 107 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 ADSSP30520 456 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 CNR2P34972 360 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 DDIT3P35638 169 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 CYP4F8P98187 520 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 POU5F1Q01860 360 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 SIM2Q14190 667 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 LRRC32Q14392 662 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 TMEM132DQ14C87 1099 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 KARSQ15046 597 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 SLC39A12Q504Y0 691 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 WSCD1Q658N2 575 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 SCARA3Q6AZY7 606 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 ADALQ6DHV7 355 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 PRR23BQ6ZRT6 265 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 ZNF720Q7Z2F6 126 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 ITIH5Q86UX2 942 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 LONP2Q86WA8 852 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 EFCAB13Q8IY85 973 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 SYNPOQ8N3V7 929 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 RIN3Q8TB24 985 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 BPIFB1Q8TDL5 484 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 GIPC2Q8TF65 315 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 CHFRQ96EP1 664 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 CALML4Q96GE6 196 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 FAM83CQ9BQN1 747 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 RTKNQ9BST9 563 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 STRA6Q9BX79 667 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 CCSER1Q9C0I3 900 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 SMG9Q9H0W8 520 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 SEMA4GQ9NTN9 838 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 CDV3Q9UKY7 258 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 DSEQ9UL01 958 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 RAB23Q9ULC3 237 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 C2CD2Q9Y426 696 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 CHD6Q8TD26 2715 aa9.03□□□□□ -0.96
CTNNA1-203ENST00000517534 OTOL1A6NHN0 477 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 DPYSL4O14531 572 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 SLC30A4O14863 429 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 HAPLN1P10915 354 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 CDC25CP30307 473 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 LONP1P36776 959 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 TAF6P49848 677 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 WNT7BP56706 349 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 SMARCB1Q12824 385 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 PON2Q15165 354 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 CSRP2Q16527 193 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 MGAT5BQ3V5L5 792 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 ARHGAP15Q53QZ3 475 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 PKN3Q6P5Z2 889 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 USP49Q70CQ1 688 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 THEM5Q8N1Q8 247 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 FAM200AQ8TCP9 573 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 SPPL2BQ8TCT7 592 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 C2orf15Q8WU43 125 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 LARP4BQ92615 738 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 SEPT5Q99719 369 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 PYM1Q9BRP8 204 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 ZHX3Q9H4I2 956 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 HPS4Q9NQG7 708 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 GKN1Q9NS71 199 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 TMLHEQ9NVH6 421 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 DPP3Q9NY33 737 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 AGO2Q9UKV8 859 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 CCL26Q9Y258 94 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 CITO14578 2027 aa9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 MAP1BP46821 2468 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-203ENST00000517534 TRDMT1O14717 391 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 EXTL3O43909 919 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 GDF9O60383 454 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 KRT18P05783 430 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 ADRB1P08588 477 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 ABCD1P33897 745 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 GPR15P49685 360 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 MCM2P49736 904 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 KCNA1Q09470 495 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 VEPH1Q14D04 833 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 SF3A1Q15459 793 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 E2F4Q16254 413 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 ITPRIPL2Q3MIP1 535 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 TMEM196Q5HYL7 178 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 HEATR6Q6AI08 1181 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 SLFN12LQ6IEE8 588 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 PRR23CQ6ZRP0 262 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms