RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 USP21Q9UK80 565 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 AGO2Q9UKV8 859 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC12A4Q9UP95 1085 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRIM33Q9UPN9 1127 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SSX2IPQ9Y2D8 614 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMX2Q9Y320 296 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 COQ4Q9Y3A0 265 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PLIN4Q96Q06 1357 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 STRCQ7RTU9 1775 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 KIAA1217Q5T5P2 1943 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLIT2O94813 1529 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 GRIN2DO15399 1336 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 AFF2P51816 1311 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 FRMPD4Q14CM0 1322 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ADGRA3Q8IWK6 1321 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRIP11Q15643 1979 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 A0A0G2JND7 137 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GOLGA8IPA6NC78 632 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZSCAN5CA6NGD5 496 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CCDC160A6NGH7 325 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LRRIQ4A6NIV6 560 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SIGLEC16A6NMB1 481 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GOLGA8JA6NMD2 632 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 KPNA7A9QM74 516 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 BHMG1C9JSJ3 638 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM86B1E9PN63 330 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLCO1B7G3V0H7 640 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 H7C0C1 242 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PIK3R2O00459 728 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NOP56O00567 594 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRAFD1O14545 582 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 WDR46O15213 610 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SPTLC1O15269 473 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 BIRC5O15392 142 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NCAM2O15394 837 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GSC2O15499 205 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 MTSS1O43312 755 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 KCNQ2O43526 872 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 XPOTO43592 962 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PRPSAP2O60256 369 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 MAGEC1O60732 1142 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 EDF1O60869 148 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 OPHN1O60890 802 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 H2AFYO75367 372 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SPAG7O75391 227 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GPC4O75487 556 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GMNNO75496 209 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 UBOX5O94941 541 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 BAG2O95816 211 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NDUFB10O96000 172 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GH2P01242 217 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TFRCP02786 760 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 KRT1P04264 644 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 APOA4P06727 396 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 KRT16P08779 473 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 HOXC6P09630 235 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM86B2P0C5J1 330 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMEM191BP0C7N4 346 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SRGAP2BP0DMP2 458 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ARP10275 920 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TGFB3P10600 412 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CYP2C8P10632 490 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 THRAP10827 490 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RALAP11233 206 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 UNGP13051 313 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ALADP13716 330 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CCNB1P14635 433 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CD19P15391 556 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PECAM1P16284 738 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 FGFR4P22455 802 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ACAT1P24752 427 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PSMA2P25787 234 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATICP31939 592 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SERPINB6P35237 376 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 COPB2P35606 906 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GJC1P36383 396 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 FLT3P36888 993 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PBX2P40425 430 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NAMPTP43490 491 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATP5OP48047 213 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 HSPA13P48723 471 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 POLD2P49005 469 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NR2C2P49116 596 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RARRES1P49788 294 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC26A2P50443 739 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PAPOLAP51003 745 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 KPNA2P52292 529 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 OAZ1P54368 228 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 HSPA2P54652 639 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NCKAP1LP55160 1127 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 POLE2P56282 527 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NLRP11P59045 1033 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RAB15P59190 212 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 EIF3EP60228 445 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 MYL6P60660 151 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RPL26P61254 145 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 IGBP1P78318 339 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 BASP1P80723 227 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms