RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 RTN2O75298 545 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 DEAF1O75398 565 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RASGRP1O95267 797 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PAPSS2O95340 614 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CRYABP02511 175 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 AMBPP02760 352 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 EDN1P05305 212 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TPOP07202 933 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 DCNP07585 359 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 HOXB5P09067 269 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZNF286BP0CG31 522 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CSB-PGBD3P0DP91 1061 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 DLATP10515 647 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RNASE3P12724 160 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RPA2P15927 270 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZNF182P17025 639 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CAPN2P17655 700 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TPSB2P20231 275 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 NPR2P20594 1047 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ATP4AP20648 1035 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ACO1P21399 889 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 MDKP21741 143 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 COMTP21964 271 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ENPP1P22413 925 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 GLRA1P23415 457 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TBXAS1P24557 533 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 DNAJA1P31689 397 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 VIPR1P32241 457 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CXCR5P32302 372 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 NTF4P34130 210 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TRHRP34981 398 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 IGFALSP35858 605 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PDE6BP35913 854 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SCNN1AP37088 669 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CTSOP43234 321 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 MAGEB1P43366 347 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 KIR2DL3P43628 341 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 MMP13P45452 471 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CDX1P47902 265 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PRIM2P49643 509 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CLK1P49759 484 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 GALK1P51570 392 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TKTL1P51854 596 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 LUMP51884 338 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ITGA8P53708 1063 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 HAP1P54257 671 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 EMP2P54851 167 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 DRG2P55039 364 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 NCKAP1LP55160 1127 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CDH15P55291 814 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 NPEPPSP55786 919 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 FCGRTP55899 365 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 IRX1P78414 480 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CD83Q01151 205 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CENPCQ03188 943 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 CD164Q04900 197 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZBTB16Q05516 673 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZNF415Q09FC8 603 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PLCXD2Q0VAA5 305 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TCF15Q12870 199 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 COX10Q12887 443 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 GRIK2Q13002 908 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 AAMPQ13685 434 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RUNX3Q13761 415 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SERTAD2Q14140 314 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SIM2Q14190 667 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZNF235Q14590 738 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 USP10Q14694 798 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 MTFR1Q15390 333 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TPSAB1Q15661 275 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZRSR1Q15695 479 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 IZUMO4Q1ZYL8 232 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ERCC6LQ2NKX8 1250 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TIMM50Q3ZCQ8 353 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SUPT20HL1Q3ZLR7 823 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 FBXL19-AS1Q494R0 122 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 KMT5BQ4FZB7 885 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 FNDC3BQ53EP0 1204 aaKnown RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 PRR30Q53SZ7 412 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TAF1BQ53T94 588 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ARMC4Q5T2S8 1044 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 AGBL2Q5U5Z8 902 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RNF20Q5VTR2 975 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SEL1L3Q68CR1 1132 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ANKRD40Q6AI12 368 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TRIM68Q6AZZ1 485 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TXNRD3NBQ6F5E7 133 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 NAPEPLDQ6IQ20 393 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 HCP5Q6MZN7 132 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 TCTN3Q6NUS6 607 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 LVRNQ6Q4G3 990 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SMARCD3Q6STE5 483 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 REG3GQ6UW15 175 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ARSKQ6UWY0 536 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 RANBP10Q6VN20 620 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 DSTYKQ6XUX3 929 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 LBX2Q6XYB7 198 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 SCARA5Q6ZMJ2 495 aa-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ZNF782Q6ZMW2 699 aaPredicted RBP-0.64□□□□□ -2.51
SCARNA20.2-201ENST00000516052 ETV3LQ6ZN32 361 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms