RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	SRCAP	Q6ZRS2	3230 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GRIN2D	O15399	1336 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SMIM28	A0A1B0GU29	152 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TCRBV5S1A1T	A0A578	114 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	FAM170A	A1A519	330 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CCDC151	A5D8V7	595 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854		M0QZ92	97 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PGRMC1	O00264	195 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PIR	O00625	290 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MED7	O43513	233 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ATP8B1	O43520	1251 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CEP104	O60308	925 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CILP	O75339	1184 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TRPA1	O75762	1119 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CABYR	O75952	493 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RECQL4	O94761	1208 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CLSTN1	O94985	981 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CD4	P01730	458 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CHRNA1	P02708	482 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CALB1	P05937	261 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	VDR	P11473	427 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	P4HA1	P13674	534 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CYP3A5	P20815	502 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	COMT	P21964	271 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MMP8	P22894	467 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RRM1	P23921	792 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	BRD2	P25440	801 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CTNNA2	P26232	953 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CTNNA1	P35221	906 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SLC1A1	P43005	524 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RAP1GAP	P47736	663 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PEX5	P50542	639 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	GUCY2F	P51841	1108 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CDH8	P55286	799 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PRMT2	P55345	433 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	C2orf54	Q08AI8	447 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	INCA1	Q0VD86	236 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PTK7	Q13308	1070 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MESD	Q14696	234 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CLUL1	Q15846	466 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	LIN9	Q5TKA1	542 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	DCAF12L1	Q5VU92	463 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PLEKHA7	Q6IQ23	1121 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TMCO3	Q6UWJ1	677 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SCARA5	Q6ZMJ2	495 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	LRRC52	Q8N7C0	313 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PCSK9	Q8NBP7	692 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SLC4A11	Q8NBS3	891 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TMEM35B	Q8NCS4	154 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SMG8	Q8ND04	991 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	BEST2	Q8NFU1	509 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CD99L2	Q8TCZ2	262 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TFAP2B	Q92481	460 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RUBCN	Q92622	972 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CD101	Q93033	1021 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	WNT8B	Q93098	351 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TMEM176A	Q96HP8	235 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.77	□□□□□ -1.65	1e-7	■■□□□ 14.4
ATP2C1-223	ENST00000515854	LRRC1	Q9BTT6	524 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TRIM6	Q9C030	488 aa	Predicted RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ELOVL4	Q9GZR5	314 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	WNT8A	Q9H1J5	351 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CARD9	Q9H257	536 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	NXF3	Q9H4D5	531 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SMYD3	Q9H7B4	428 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MRPL47	Q9HD33	250 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CHST12	Q9NRB3	414 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RBM12	Q9NTZ6	932 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ZNF446	Q9NWS9	450 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	FAM53C	Q9NYF3	392 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	SMARCAL1	Q9NZC9	954 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ADAM22	Q9P0K1	906 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	DDX20	Q9UHI6	824 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TSR3	Q9UJK0	312 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	KIAA1257	Q9ULG3	409 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	UBQLN1	Q9UMX0	589 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PIN4	Q9Y237	131 aa	Known RBP	4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	HES2	Q9Y543	173 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	IPP	Q9Y573	584 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PCDHA3	Q9Y5H8	950 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CDY2A	Q9Y6F7	541 aa		4.77	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CCDC66	A2RUB6	948 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TMEM191C	A6NGB0	347 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	MOXD2P	A6NHM9	499 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TMEM110-MUSTN1	A8MSY1	372 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CCDC188	H7C350	402 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TNFRSF10A	O00220	468 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854		O00370	1275 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	PPEF2	O14830	753 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	GPR182	O15218	404 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	TLR3	O15455	904 aa	Known RBP	4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	XPOT	O43592	962 aa	Known RBP	4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	CAND2	O75155	1236 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	ERLIN1	O75477	346 aa		4.76	□□□□□ -1.65
ATP2C1-223	ENST00000515854	RPS6KA5	O75582	802 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms