RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 PTPAQ15257 358 aa16.24■□□□□ 0.19
DDR1-278ENST00000515233 CSRP2Q16527 193 aa16.24■□□□□ 0.19
DDR1-278ENST00000515233 ZC2HC1CQ53FD0 456 aaPredicted RBP16.24■□□□□ 0.19
DDR1-278ENST00000515233 Q6ZS52 159 aa16.24■□□□□ 0.19
DDR1-278ENST00000515233 LRRTM3Q86VH5 581 aa16.24■□□□□ 0.19
DDR1-278ENST00000515233 NT5DC4Q86YG4 428 aa16.24■□□□□ 0.19
DDR1-278ENST00000515233 TTC8Q8TAM2 541 aa16.24■□□□□ 0.19
DDR1-278ENST00000515233 NETO1Q8TDF5 533 aa16.24■□□□□ 0.19
DDR1-278ENST00000515233 LARP4BQ92615 738 aaKnown RBP16.24■□□□□ 0.19
DDR1-278ENST00000515233 ZHX3Q9H4I2 956 aa16.24■□□□□ 0.19
DDR1-278ENST00000515233 AGO2Q9UKV8 859 aaKnown RBP16.24■□□□□ 0.19
DDR1-278ENST00000515233 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.24■□□□□ 0.19
DDR1-278ENST00000515233 KPNA7A9QM74 516 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 SLC30A4O14863 429 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 FOXD2O60548 495 aaPredicted RBP16.23■□□□□ 0.19
DDR1-278ENST00000515233 HAPLN1P10915 354 aaPredicted RBP16.23■□□□□ 0.19
DDR1-278ENST00000515233 MCM2P49736 904 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 GRIN1Q05586 938 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 TNK2Q07912 1038 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 ITPRIPL2Q3MIP1 535 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 CRELD2Q6UXH1 353 aaPredicted RBP16.23■□□□□ 0.19
DDR1-278ENST00000515233 ZNF720Q7Z2F6 126 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 WDR5BQ86VZ2 330 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 CMTM8Q8IZV2 173 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 GCNAQ96QF7 691 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 FAM83CQ9BQN1 747 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 PYM1Q9BRP8 204 aaKnown RBP16.23■□□□□ 0.19
DDR1-278ENST00000515233 C2orf42Q9NWW7 574 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 TCHHQ07283 1943 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 DENND4CQ5VZ89 1909 aa16.23■□□□□ 0.19
DDR1-278ENST00000515233 KIF26AQ9ULI4 1882 aaPredicted RBP16.22■□□□□ 0.19
DDR1-278ENST00000515233 NCOR2Q9Y618 2525 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 CCDC163A0A0D9SF12 145 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 TISP43B9A030 160 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
DDR1-278ENST00000515233 F11P03951 625 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 SRSF5Q13243 272 aaKnown RBP16.22■□□□□ 0.19
DDR1-278ENST00000515233 POSTNQ15063 836 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 TAF12Q16514 161 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 WSCD1Q658N2 575 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 LARP1BQ659C4 914 aaKnown RBP16.22■□□□□ 0.19
DDR1-278ENST00000515233 PRR23CQ6ZRP0 262 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 TMEM150AQ86TG1 271 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 DCP1BQ8IZD4 617 aaKnown RBP16.22■□□□□ 0.19
DDR1-278ENST00000515233 KRI1Q8N9T8 703 aaKnown RBP16.22■□□□□ 0.19
DDR1-278ENST00000515233 GIPC2Q8TF65 315 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 HVCN1Q96D96 273 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 CNTNAP3BQ96NU0 1288 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 STRA6Q9BX79 667 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 CNTNAP3Q9BZ76 1288 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 GKN1Q9NS71 199 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 RALGAPA1Q6GYQ0 2036 aa16.22■□□□□ 0.19
DDR1-278ENST00000515233 PPP1R37O75864 691 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 IL18RAPO95256 599 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 ADRB1P08588 477 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 HMGA1P17096 107 aaKnown RBP16.21■□□□□ 0.19
DDR1-278ENST00000515233 DDX6P26196 483 aaKnown RBP eCLIP16.21■□□□□ 0.19
DDR1-278ENST00000515233 ADSSP30520 456 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 RUNX3Q13761 415 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 SF3A1Q15459 793 aaKnown RBP16.21■□□□□ 0.19
DDR1-278ENST00000515233 SV2CQ496J9 727 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 HEATR6Q6AI08 1181 aaKnown RBP16.21■□□□□ 0.19
DDR1-278ENST00000515233 BRAPQ7Z569 592 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.21■□□□□ 0.19
DDR1-278ENST00000515233 EFCAB13Q8IY85 973 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 RASSF8Q8NHQ8 419 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 TDP1Q9NUW8 608 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 SMC3Q9UQE7 1217 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.21■□□□□ 0.19
DDR1-278ENST00000515233 PCDHB5Q9Y5E4 795 aa16.21■□□□□ 0.19
DDR1-278ENST00000515233 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.2■□□□□ 0.18
DDR1-278ENST00000515233 TRDMT1O14717 391 aaKnown RBP16.2■□□□□ 0.18
DDR1-278ENST00000515233 CSH1P0DML2 217 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 CSH2P0DML3 217 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 AVPR1AP37288 418 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 PNPLA4P41247 253 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 NLRP12P59046 1061 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 TMEM196Q5HYL7 178 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 FAM160A2Q8N612 972 aaPredicted RBP16.2■□□□□ 0.18
DDR1-278ENST00000515233 POMGNT1Q8WZA1 660 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 SMG9Q9H0W8 520 aaKnown RBP16.2■□□□□ 0.18
DDR1-278ENST00000515233 KIF9Q9HAQ2 790 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 HPS4Q9NQG7 708 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 TMLHEQ9NVH6 421 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 ABI2Q9NYB9 513 aaPredicted RBP16.2■□□□□ 0.18
DDR1-278ENST00000515233 SEL1LQ9UBV2 794 aa16.2■□□□□ 0.18
DDR1-278ENST00000515233 ATG13O75143 517 aa16.19■□□□□ 0.18
DDR1-278ENST00000515233 CDR1P51861 262 aa16.19■□□□□ 0.18
DDR1-278ENST00000515233 AMPD2Q01433 879 aa16.19■□□□□ 0.18
DDR1-278ENST00000515233 NFE2Q16621 373 aaPredicted RBP16.19■□□□□ 0.18
DDR1-278ENST00000515233 CEP68Q76N32 757 aa16.19■□□□□ 0.18
DDR1-278ENST00000515233 SFR1Q86XK3 245 aa16.19■□□□□ 0.18
DDR1-278ENST00000515233 MAB21L3Q8N8X9 362 aa16.19■□□□□ 0.18
DDR1-278ENST00000515233 LEO1Q8WVC0 666 aaPredicted RBP16.19■□□□□ 0.18
DDR1-278ENST00000515233 USP13Q92995 863 aaPredicted RBP16.19■□□□□ 0.18
DDR1-278ENST00000515233 EPSTI1Q96J88 318 aa16.19■□□□□ 0.18
DDR1-278ENST00000515233 LOXL4Q96JB6 756 aa16.19■□□□□ 0.18
DDR1-278ENST00000515233 ZNF560Q96MR9 790 aa16.19■□□□□ 0.18
DDR1-278ENST00000515233 ACBD6Q9BR61 282 aa16.19■□□□□ 0.18
DDR1-278ENST00000515233 IKZF4Q9H2S9 585 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms