RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 PRMT8Q9NR22 394 aaPredicted RBP14.35□□□□□ -0.11
PFDN1-206ENST00000514611 TFIP11Q9UBB9 837 aaKnown RBP14.35□□□□□ -0.11
PFDN1-206ENST00000514611 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
PFDN1-206ENST00000514611 AGAP1Q9UPQ3 857 aa14.35□□□□□ -0.11
PFDN1-206ENST00000514611 PTPRJQ12913 1337 aa14.35□□□□□ -0.11
PFDN1-206ENST00000514611 TICRRQ7Z2Z1 1910 aa14.35□□□□□ -0.11
PFDN1-206ENST00000514611 SLC38A8A6NNN8 435 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 MAN2B1O00754 1011 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 HCRTO43612 131 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 EXTL3O43909 919 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 KINO60870 393 aaKnown RBP14.34□□□□□ -0.11
PFDN1-206ENST00000514611 HAPLN1P10915 354 aaPredicted RBP14.34□□□□□ -0.11
PFDN1-206ENST00000514611 ACAT1P24752 427 aaKnown RBP14.34□□□□□ -0.11
PFDN1-206ENST00000514611 CCNE1P24864 410 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 PNPLA4P41247 253 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 BFSP1Q12934 665 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 ZNF528Q3MIS6 628 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 FOXD4L6Q3SYB3 417 aaPredicted RBP14.34□□□□□ -0.11
PFDN1-206ENST00000514611 FOXD4L3Q6VB84 417 aaPredicted RBP14.34□□□□□ -0.11
PFDN1-206ENST00000514611 CCDC65Q8IXS2 484 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 YAF2Q8IY57 180 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 TTC8Q8TAM2 541 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 SPPL2BQ8TCT7 592 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 C2orf15Q8WU43 125 aaKnown RBP14.34□□□□□ -0.11
PFDN1-206ENST00000514611 E2F7Q96AV8 911 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 DHX58Q96C10 678 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 HINFPQ9BQA5 517 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 SMG9Q9H0W8 520 aaKnown RBP14.34□□□□□ -0.11
PFDN1-206ENST00000514611 TNMDQ9H2S6 317 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 CHRDQ9H2X0 955 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 TMEM206Q9H813 350 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 PDE11AQ9HCR9 933 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 SIX4Q9UIU6 781 aa14.34□□□□□ -0.11
PFDN1-206ENST00000514611 DMXL1Q9Y485 3027 aa14.33□□□□□ -0.11
PFDN1-206ENST00000514611 CHADO15335 359 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 PPP6R2O75170 966 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 FGF19O95750 216 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 LDHAP00338 332 aaKnown RBP14.33□□□□□ -0.12
PFDN1-206ENST00000514611 KRT19P08727 400 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 CDC25CP30307 473 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 HOXD13P35453 343 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
PFDN1-206ENST00000514611 ARHGAP15Q53QZ3 475 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 WDR44Q5JSH3 913 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 SDHAF4Q5VUM1 108 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 SHC4Q6S5L8 630 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 OSTM1Q86WC4 334 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 CBWD2Q8IUF1 395 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 DCP1BQ8IZD4 617 aaKnown RBP14.33□□□□□ -0.12
PFDN1-206ENST00000514611 GPD1LQ8N335 351 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 DCLK2Q8N568 766 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 CSGALNACT2Q8N6G5 542 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 SUMF1Q8NBK3 374 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 CSGALNACT1Q8TDX6 532 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 GCNAQ96QF7 691 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 PI4K2AQ9BTU6 479 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 TRIM9Q9C026 710 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 KBTBD4Q9NVX7 518 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 DDX43Q9NXZ2 648 aaKnown RBP14.33□□□□□ -0.12
PFDN1-206ENST00000514611 GTSE1Q9NYZ3 720 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 ITGA11Q9UKX5 1188 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 PCDHB5Q9Y5E4 795 aa14.33□□□□□ -0.12
PFDN1-206ENST00000514611 DPYSL4O14531 572 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 YEATS4O95619 227 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 TMEM191BP0C7N4 346 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 CHRNB1P11230 501 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 ASIC1P78348 528 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 TSPY1Q01534 308 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 TNK2Q07912 1038 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 SMARCB1Q12824 385 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 GAS6Q14393 721 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 TAF12Q16514 161 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 INTS6LQ5JSJ4 861 aaKnown RBP14.32□□□□□ -0.12
PFDN1-206ENST00000514611 TXNDC11Q6PKC3 985 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 TMEM150AQ86TG1 271 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 KIAA2013Q8IYS2 634 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 ZBTB44Q8NCP5 570 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 OR5B17Q8NGF7 314 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 CACTINQ8WUQ7 758 aaKnown RBP14.32□□□□□ -0.12
PFDN1-206ENST00000514611 TASP1Q9H6P5 420 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 LMAN1LQ9HAT1 526 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 RBM12Q9NTZ6 932 aaKnown RBP14.32□□□□□ -0.12
PFDN1-206ENST00000514611 ZSCAN32Q9NX65 697 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 PCDHGA2Q9Y5H1 932 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 SNX9Q9Y5X1 595 aa14.32□□□□□ -0.12
PFDN1-206ENST00000514611 HUS1O60921 280 aa14.31□□□□□ -0.12
PFDN1-206ENST00000514611 PRPF40AO75400 957 aaKnown RBP14.31□□□□□ -0.12
PFDN1-206ENST00000514611 TADA3O75528 432 aa14.31□□□□□ -0.12
PFDN1-206ENST00000514611 TDGF1P13385 188 aa14.31□□□□□ -0.12
PFDN1-206ENST00000514611 HMGA1P17096 107 aaKnown RBP14.31□□□□□ -0.12
PFDN1-206ENST00000514611 CASP1P29466 404 aa14.31□□□□□ -0.12
PFDN1-206ENST00000514611 CTHP32929 405 aa14.31□□□□□ -0.12
PFDN1-206ENST00000514611 ID4P47928 161 aa14.31□□□□□ -0.12
PFDN1-206ENST00000514611 KPNA1P52294 538 aaPredicted RBP14.31□□□□□ -0.12
PFDN1-206ENST00000514611 ADGRF2Q8IZF7 708 aa14.31□□□□□ -0.12
PFDN1-206ENST00000514611 BPIFB1Q8TDL5 484 aa14.31□□□□□ -0.12
PFDN1-206ENST00000514611 LEO1Q8WVC0 666 aaPredicted RBP14.31□□□□□ -0.12
PFDN1-206ENST00000514611 RUBCNQ92622 972 aa14.31□□□□□ -0.12
PFDN1-206ENST00000514611 NELL1Q92832 810 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms