RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ALF	Q53S48	1182 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	AGAP9	Q5VTM2	703 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PGBD2	Q6P3X8	592 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	FOXR2	Q6PJQ5	311 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TMED8	Q6PL24	325 aa	Predicted RBP	4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ZNF627	Q7L945	461 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	XYLT1	Q86Y38	959 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	DNAJC10	Q8IXB1	793 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	RNF152	Q8N8N0	203 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CCT6B	Q92526	530 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NMD3	Q96D46	503 aa	Known RBP	4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TMX3	Q96JJ7	454 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MRGPRX1	Q96LB2	322 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NT5C1B	Q96P26	610 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MED15	Q96RN5	788 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CRAMP1	Q96RY5	1269 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	VRK1	Q99986	396 aa	Predicted RBP	4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	RNF181	Q9P0P0	153 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	DGKB	Q9Y6T7	804 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267		A0A087WV62	115 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267		A0A1W2PPC4	97 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PIPSL	A2A3N6	862 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	POM121B	A6NF01	834 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	DRGX	A6NNA5	263 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MARCH11	A6NNE9	402 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NT5C1B-RDH14	C9J2C7	533 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	OVOL3	O00110	214 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	GPR32	O75388	356 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NCR1	O76036	304 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CDKL5	O76039	1030 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NDUFA10	O95299	355 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	AMY1A	P04745	511 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CFI	P05156	583 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PARP1	P09874	1014 aa	Known RBP	4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NPR1	P16066	1061 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	DDC	P20711	480 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ABCB4	P21439	1286 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PRDX5	P30044	214 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ARFIP2	P53365	341 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	BIRC3	Q13489	604 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MTM1	Q13496	603 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ELF2	Q15723	593 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	FLYWCH1	Q4VC44	716 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MFSD14B	Q5SR56	506 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	HECTD2	Q5U5R9	776 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	STRIP1	Q5VSL9	837 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CCDC70	Q6NSX1	233 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PCSK4	Q6UW60	755 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	COL23A1	Q86Y22	540 aa	Predicted RBP	4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	FAM90A1	Q86YD7	464 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CPEB3	Q8NE35	698 aa	Known RBP	4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	KIAA1191	Q96A73	305 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CEP95	Q96GE4	821 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MRI1	Q9BV20	369 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MLST8	Q9BVC4	326 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	EIF2A	Q9BY44	585 aa	Known RBP	4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	DPH1	Q9BZG8	443 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SERHL2	Q9H4I8	314 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SERHL	Q9NQF3	203 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	STAP2	Q9UGK3	403 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	AFF4	Q9UHB7	1163 aa	Known RBP	4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	KCNE5	Q9UJ90	142 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ZDHHC8	Q9ULC8	765 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	LZTS1	Q9Y250	596 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NEU2	Q9Y3R4	380 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ZMYM3	Q14202	1370 aa		4.11	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CENPVL1	A0A0U1RR11	272 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	GRID2IP	A4D2P6	1211 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NCK2	O43639	380 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	RAP2A	P10114	183 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	KIT	P10721	976 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	BRAF	P15056	766 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NR4A1	P22736	598 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	RENBP	P51606	427 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CREM	Q03060	361 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	BLMH	Q13867	455 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TRIM14	Q14142	442 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	KHDC1L	Q5JSQ8	128 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SEM1	Q6ZVN7	128 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SESTD1	Q86VW0	696 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SKAP1	Q86WV1	359 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SYTL1	Q8IYJ3	562 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	COLGALT2	Q8IYK4	626 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SH2D3C	Q8N5H7	860 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PAF1	Q8N7H5	531 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CCHCR1	Q8TD31	782 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CAVIN3	Q969G5	261 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TRIM63	Q969Q1	353 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	AGAP2	Q99490	1192 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TTLL2	Q9BWV7	592 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	BRIP1	Q9BX63	1249 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TRIM54	Q9BYV2	358 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MYLK2	Q9H1R3	596 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MRPL46	Q9H2W6	279 aa	Known RBP	4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	GALNT9	Q9HCQ5	603 aa		4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.1	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CPA4	Q9UI42	421 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms