RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 HOXA6P31267 233 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 CNR2P34972 360 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 ARHGAP8P85298 464 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 MGAT5BQ3V5L5 792 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 SV2BQ7L1I2 683 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 LRRTM3Q86VH5 581 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 EFCAB13Q8IY85 973 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 SPATA18Q8TC71 538 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 BPIFB1Q8TDL5 484 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 MRPL44Q9H9J2 332 aaKnown RBP27.22■■□□□ 1.95
CLDND1-226ENST00000513287 PCDHB13Q9Y5F0 798 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 CLIC4Q9Y696 253 aa27.22■■□□□ 1.95
CLDND1-226ENST00000513287 SPECC1L-ADORA2AF8WAN1 911 aa27.21■■□□□ 1.95
CLDND1-226ENST00000513287 GARTP22102 1010 aa27.21■■□□□ 1.95
CLDND1-226ENST00000513287 DDX6P26196 483 aaKnown RBP eCLIP27.21■■□□□ 1.95
CLDND1-226ENST00000513287 CTHP32929 405 aa27.21■■□□□ 1.95
CLDND1-226ENST00000513287 TXLNAP40222 546 aa27.21■■□□□ 1.95
CLDND1-226ENST00000513287 KPNA1P52294 538 aaPredicted RBP27.21■■□□□ 1.95
CLDND1-226ENST00000513287 GAS6Q14393 721 aa27.21■■□□□ 1.95
CLDND1-226ENST00000513287 L1TD1Q5T7N2 865 aaKnown RBP27.21■■□□□ 1.95
CLDND1-226ENST00000513287 RRAGBQ5VZM2 374 aa27.21■■□□□ 1.95
CLDND1-226ENST00000513287 WSCD1Q658N2 575 aa27.21■■□□□ 1.95
CLDND1-226ENST00000513287 DYMQ7RTS9 669 aa27.21■■□□□ 1.95
CLDND1-226ENST00000513287 LEO1Q8WVC0 666 aaPredicted RBP27.21■■□□□ 1.95
CLDND1-226ENST00000513287 ACCSQ96QU6 501 aa27.21■■□□□ 1.95
CLDND1-226ENST00000513287 FRMD3A2A2Y4 597 aa27.2■■□□□ 1.94
CLDND1-226ENST00000513287 MYMKA6NI61 221 aa27.2■■□□□ 1.94
CLDND1-226ENST00000513287 SOAT2O75908 522 aa27.2■■□□□ 1.94
CLDND1-226ENST00000513287 TGM1P22735 817 aa27.2■■□□□ 1.94
CLDND1-226ENST00000513287 CACTINQ8WUQ7 758 aaKnown RBP27.2■■□□□ 1.94
CLDND1-226ENST00000513287 GCNAQ96QF7 691 aa27.2■■□□□ 1.94
CLDND1-226ENST00000513287 SEPT5Q99719 369 aaPredicted RBP27.2■■□□□ 1.94
CLDND1-226ENST00000513287 LPIN3Q9BQK8 851 aa27.2■■□□□ 1.94
CLDND1-226ENST00000513287 THG1LQ9NWX6 298 aaKnown RBP27.2■■□□□ 1.94
CLDND1-226ENST00000513287 KIF26AQ9ULI4 1882 aaPredicted RBP27.19■■□□□ 1.94
CLDND1-226ENST00000513287 VPS37CA5D8V6 355 aaPredicted RBP27.19■■□□□ 1.94
CLDND1-226ENST00000513287 LRP3O75074 770 aa27.19■■□□□ 1.94
CLDND1-226ENST00000513287 LMNB2Q03252 620 aa27.19■■□□□ 1.94
CLDND1-226ENST00000513287 NFE2Q16621 373 aaPredicted RBP27.19■■□□□ 1.94
CLDND1-226ENST00000513287 LAIR1Q6GTX8 287 aa27.19■■□□□ 1.94
CLDND1-226ENST00000513287 CCDC73Q6ZRK6 1079 aa27.19■■□□□ 1.94
CLDND1-226ENST00000513287 BRSK2Q8IWQ3 736 aa27.19■■□□□ 1.94
CLDND1-226ENST00000513287 FAM200AQ8TCP9 573 aa27.19■■□□□ 1.94
CLDND1-226ENST00000513287 ACBD6Q9BR61 282 aa27.19■■□□□ 1.94
CLDND1-226ENST00000513287 GMEB2Q9UKD1 530 aa27.19■■□□□ 1.94
CLDND1-226ENST00000513287 PCDHB5Q9Y5E4 795 aa27.19■■□□□ 1.94
CLDND1-226ENST00000513287 SLC38A8A6NNN8 435 aa27.18■■□□□ 1.94
CLDND1-226ENST00000513287 CCINQ13939 588 aa27.18■■□□□ 1.94
CLDND1-226ENST00000513287 TAF12Q16514 161 aa27.18■■□□□ 1.94
CLDND1-226ENST00000513287 RSPO4Q2I0M5 234 aaPredicted RBP27.18■■□□□ 1.94
CLDND1-226ENST00000513287 CMTM8Q8IZV2 173 aa27.18■■□□□ 1.94
CLDND1-226ENST00000513287 TMEM86AQ8N2M4 240 aa27.18■■□□□ 1.94
CLDND1-226ENST00000513287 LRRC52Q8N7C0 313 aa27.18■■□□□ 1.94
CLDND1-226ENST00000513287 SLC46A2Q9BY10 475 aa27.18■■□□□ 1.94
CLDND1-226ENST00000513287 ABCB6Q9NP58 842 aa27.18■■□□□ 1.94
CLDND1-226ENST00000513287 GTSE1Q9NYZ3 720 aa27.18■■□□□ 1.94
CLDND1-226ENST00000513287 RAB23Q9ULC3 237 aa27.18■■□□□ 1.94
CLDND1-226ENST00000513287 KIAA0391O15091 583 aaKnown RBP27.17■■□□□ 1.94
CLDND1-226ENST00000513287 F11P03951 625 aa27.17■■□□□ 1.94
CLDND1-226ENST00000513287 HMGA1P17096 107 aaKnown RBP27.17■■□□□ 1.94
CLDND1-226ENST00000513287 SATB1Q01826 763 aa27.17■■□□□ 1.94
CLDND1-226ENST00000513287 KCNA1Q09470 495 aa27.17■■□□□ 1.94
CLDND1-226ENST00000513287 RESTQ13127 1097 aa27.17■■□□□ 1.94
CLDND1-226ENST00000513287 TMEM150AQ86TG1 271 aa27.17■■□□□ 1.94
CLDND1-226ENST00000513287 CXorf38Q8TB03 319 aa27.17■■□□□ 1.94
CLDND1-226ENST00000513287 INTS4Q96HW7 963 aaKnown RBP27.17■■□□□ 1.94
CLDND1-226ENST00000513287 KIF9Q9HAQ2 790 aa27.17■■□□□ 1.94
CLDND1-226ENST00000513287 GDAP2Q9NXN4 497 aa27.17■■□□□ 1.94
CLDND1-226ENST00000513287 PRAMEF12O95522 483 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 CSH1P0DML2 217 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 CSH2P0DML3 217 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 SYT1P21579 422 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 TSPY1Q01534 308 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 ITPRIPL2Q3MIP1 535 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 WDR44Q5JSH3 913 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 TXNDC11Q6PKC3 985 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 FAM83CQ9BQN1 747 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 FAM213AQ9BRX8 229 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 IKZF4Q9H2S9 585 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 TMEM206Q9H813 350 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 ITGA11Q9UKX5 1188 aa27.16■■□□□ 1.94
CLDND1-226ENST00000513287 K7ESF4 209 aa27.15■■□□□ 1.94
CLDND1-226ENST00000513287 GCNT3O95395 438 aa27.15■■□□□ 1.94
CLDND1-226ENST00000513287 RETP07949 1114 aa27.15■■□□□ 1.94
CLDND1-226ENST00000513287 SOX9P48436 509 aa27.15■■□□□ 1.94
CLDND1-226ENST00000513287 NLRP12P59046 1061 aa27.15■■□□□ 1.94
CLDND1-226ENST00000513287 CYP4F8P98187 520 aa27.15■■□□□ 1.94
CLDND1-226ENST00000513287 SLC39A14Q15043 492 aa27.15■■□□□ 1.94
CLDND1-226ENST00000513287 LONP2Q86WA8 852 aa27.15■■□□□ 1.94
CLDND1-226ENST00000513287 C1orf127Q8N9H9 656 aa27.15■■□□□ 1.94
CLDND1-226ENST00000513287 CLIC6Q96NY7 704 aa27.15■■□□□ 1.94
CLDND1-226ENST00000513287 ABI2Q9NYB9 513 aaPredicted RBP27.15■■□□□ 1.94
CLDND1-226ENST00000513287 EXTL3O43909 919 aa27.14■■□□□ 1.94
CLDND1-226ENST00000513287 HUS1O60921 280 aa27.14■■□□□ 1.94
CLDND1-226ENST00000513287 ZNF268Q14587 947 aaPredicted RBP27.14■■□□□ 1.94
CLDND1-226ENST00000513287 DPH6Q7L8W6 267 aa27.14■■□□□ 1.94
CLDND1-226ENST00000513287 PDCL2Q8N4E4 241 aa27.14■■□□□ 1.94
CLDND1-226ENST00000513287 GIPC2Q8TF65 315 aa27.14■■□□□ 1.94
CLDND1-226ENST00000513287 TRMT2BQ96GJ1 504 aaKnown RBP27.14■■□□□ 1.94
CLDND1-226ENST00000513287 ZFYVE19Q96K21 471 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms