RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 OR4M1Q8NGD0 313 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZFAND2BQ8WV99 257 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 WDR60Q8WVS4 1066 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 IRGQQ8WZA9 623 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 BTN2A3PQ96KV6 586 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PCYT2Q99447 389 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRRX2Q99811 253 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 RUBCNLQ9H714 662 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPRD1BQ9NQG5 326 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ABI2Q9NYB9 513 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 DNAI1Q9UI46 699 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 A0A088AWK7 358 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 IGKV6-21A0A0C4DH24 114 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRR19A6NJB7 356 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 GCOM1H8Y6P7 765 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 IFIT3O14879 490 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ANKRD28O15084 1053 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 RGS5O15539 181 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 EXOC3O60645 756 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 JRKO75564 520 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 GCM2O75603 506 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 THBS1P07996 1170 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 MYZAPP0CAP1 466 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 RFC2P35250 354 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 FXR2P51116 673 aaKnown RBP eCLIP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC8A3P57103 927 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SNRPNP63162 240 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 NFX1Q12986 1120 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CALCOCO2Q13137 446 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 DIXDC1Q155Q3 683 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TBCCQ15814 346 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 NBPF9Q3BBW0 867 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIM60Q495X7 471 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ASPRV1Q53RT3 343 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 C1orf141Q5JVX7 400 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SH2D4BQ5SQS7 431 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 C12orf60Q5U649 245 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC102BQ68D86 513 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPECC1LQ69YQ0 1117 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 NCAPH2Q6IBW4 605 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 POTEGQ6S5H5 508 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIM72Q6ZMU5 477 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 GADL1Q6ZQY3 521 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 C1orf186Q6ZWK4 172 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 BTLAQ7Z6A9 289 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 LUZP2Q86TE4 346 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TTC7BQ86TV6 843 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF354CQ86Y25 554 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PQLC3Q8N755 202 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIML1Q8N9V2 468 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 MICAL1Q8TDZ2 1067 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF296Q8WUU4 475 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SORCS1Q8WY21 1168 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 IFT81Q8WYA0 676 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SOSTQ9BQB4 213 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 DESI2Q9BSY9 194 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SCRT1Q9BWW7 348 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TEX12Q9BXU0 123 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 IFIH1Q9BYX4 1025 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC113Q9H0I3 377 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 XPNPEP1Q9NQW7 623 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SH2B1Q9NRF2 756 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 GPR27Q9NS67 375 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 DONSONQ9NYP3 566 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 VPS54Q9P1Q0 977 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 RIMS3Q9UJD0 308 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ITM2BQ9Y287 266 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 COPG1Q9Y678 874 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 MYO7BQ6PIF6 2116 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 A0A0G2JMP0 313 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 DENND3A2RUS2 1198 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 WIPF3A6NGB9 483 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC85CA6NKD9 419 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TK2O00142 265 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 AKAP3O75969 853 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 GLRX3O76003 335 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ALDH1A2O94788 518 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CD37P11049 281 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 KRT10P13645 584 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC130P13994 396 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 XPAP23025 273 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ALDH3A1P30838 453 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SSR1P43307 286 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 EPHA5P54756 1037 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 MFGE8Q08431 387 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDCLQ13371 301 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC57Q2TAC2 916 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 FOXD4L5Q5VV16 416 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 KCTD11Q693B1 232 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 KRT40Q6A162 431 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDE12Q6L8Q7 609 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CRIP3Q6Q6R5 217 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PACS1Q6VY07 963 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TOM1L2Q6ZVM7 507 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRPM8Q7Z2W7 1104 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 KANSL1Q7Z3B3 1105 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ERO1BQ86YB8 467 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC9A9Q8IVB4 645 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 C12orf56Q8IXR9 622 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms