RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TRIP4Q15650 581 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 CCDC149Q6ZUS6 474 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 MYCBPAPQ8TBZ2 947 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 STAMQ92783 540 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 PBXIP1Q96AQ6 731 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 DCUN1D1Q96GG9 259 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 CCDC28BQ9BUN5 200 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 TMEM134Q9H6X4 195 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 EFCC1Q9HA90 598 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 MTO1Q9Y2Z2 717 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 PCDHB6Q9Y5E3 794 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 NR2E3Q9Y5X4 410 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 TPRP12270 2363 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 A0A087WZ62 844 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 LRRD1A4D1F6 860 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 F5H6K3 240 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 XYLBO75191 536 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ERN1O75460 977 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GSTM1P09488 218 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GRK2P25098 689 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 TNFRSF8P28908 595 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SLC11A2P49281 568 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CYP2J2P51589 502 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ROR1Q01973 937 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GSTM4Q03013 218 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 KLRC3Q07444 240 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 LRRC38Q5VT99 294 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 C4orf19Q8IY42 314 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SYT2Q8N9I0 419 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 EXD1Q8NHP7 514 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SNIP1Q8TAD8 396 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 RAET1EQ8TD07 263 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 U2AF1L4Q8WU68 220 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 C19orf60Q96EN9 201 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CYFIP2Q96F07 1278 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 KCNK16Q96T55 309 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 NLNQ9BYT8 704 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 AVENQ9NQS1 362 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CHCHD3Q9NX63 227 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 TRMT1Q9NXH9 659 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 MDC1Q14676 2089 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 LOC285556D6RIA3 1793 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 A0A1B0GTH6 734 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ESRRBO95718 433 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SPRP35270 261 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CCZ1BP86790 482 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CCZ1P86791 482 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GCNT1Q02742 428 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 NR5A1Q13285 461 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 DYNC1I2Q13409 638 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 E4F1Q66K89 784 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 TWF2Q6IBS0 349 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CENPPQ6IPU0 288 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 DSTYKQ6XUX3 929 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ST13P4Q8IZP2 240 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 FKBP10Q96AY3 582 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CYTH2Q99418 400 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 RBBP8Q99708 897 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ARID3AQ99856 593 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ST7Q9NRC1 585 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ZBTB21Q9ULJ3 1066 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SF3B1O75533 1304 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 PRR36Q9H6K5 1346 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SCN1AP35498 2009 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 PMM2O15305 246 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 KIF1CO43896 1103 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 FAM107AO95990 144 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 HMGCRP04035 888 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 POLBP06746 335 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ZBTB48P10074 688 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GNA15P30679 374 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CAPZA2P47755 286 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 BACE1P56817 501 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SNCBQ16143 134 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 MUM1Q2TAK8 710 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SLC45A4Q5BKX6 768 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 TFDP3Q5H9I0 405 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 HECTD3Q5T447 861 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 FGD4Q96M96 766 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 NIF3L1Q9GZT8 377 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 RNF146Q9NTX7 359 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SAP30BPQ9UHR5 308 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SLC24A2Q9UI40 661 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 SCOCQ9UIL1 159 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 ZBTB1Q9Y2K1 713 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 IRS2Q9Y4H2 1338 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 IFRD1O00458 451 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 BUB1O43683 1085 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GSNP06396 782 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 PABPC1P11940 636 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CCDC130P13994 396 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 IL10P22301 178 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 GCKP35557 465 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 IFNGR2P38484 337 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 TFAMQ00059 246 aaKnown RBP5.16□□□□□ -1.58
PTPN13-209ENST00000511467 PTK2BQ14289 1009 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 NAB2Q15742 525 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 PI16Q6UXB8 463 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 CEP57Q86XR8 500 aa5.16□□□□□ -1.58
PTPN13-209ENST00000511467 WDR49Q8IV35 697 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms