RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PRRG1O14668 218 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 C8AP07357 584 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 HNRNPA1P09651 372 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL6A6-203ENST00000511332 OR4Q2P0C623 313 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 SPATA31D3P0C874 917 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 HOXA9P31269 272 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 GPR17Q13304 367 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 SMAD4Q13485 552 aaKnown RBP13.75□□□□□ -0.21
COL6A6-203ENST00000511332 MAPRE1Q15691 268 aaKnown RBP13.75□□□□□ -0.21
COL6A6-203ENST00000511332 NFE2Q16621 373 aaPredicted RBP13.75□□□□□ -0.21
COL6A6-203ENST00000511332 SLC39A12Q504Y0 691 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 TCP11X2Q5H9J9 407 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 INTS6LQ5JSJ4 861 aaKnown RBP13.75□□□□□ -0.21
COL6A6-203ENST00000511332 PPM1LQ5SGD2 360 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 SPOPLQ6IQ16 392 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 CES5AQ6NT32 575 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 SPATA31D4Q6ZUB0 917 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 TCEAL8Q8IYN2 117 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 TTC39CQ8N584 583 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 AOPEPQ8N6M6 819 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 CMASQ8NFW8 434 aaPredicted RBP13.75□□□□□ -0.21
COL6A6-203ENST00000511332 OR6B3Q8NGW1 331 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 SLC7A14Q8TBB6 771 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 SEMA4DQ92854 862 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 MRPL45Q9BRJ2 306 aaKnown RBP13.75□□□□□ -0.21
COL6A6-203ENST00000511332 TUBGCP2Q9BSJ2 902 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 CYP3A43Q9HB55 503 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 PRDM6Q9NQX0 595 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 SAMSN1Q9NSI8 373 aaKnown RBP13.75□□□□□ -0.21
COL6A6-203ENST00000511332 GCNT4Q9P109 453 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 HSFX1Q9UBD0 423 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 CDH9Q9ULB4 789 aa13.75□□□□□ -0.21
COL6A6-203ENST00000511332 GTPBP10A4D1E9 387 aaKnown RBP13.74□□□□□ -0.21
COL6A6-203ENST00000511332 MTMR11A4FU01 709 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 ZMYND10O75800 440 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 TBXAS1P24557 533 aaPredicted RBP13.74□□□□□ -0.21
COL6A6-203ENST00000511332 ACAT1P24752 427 aaKnown RBP13.74□□□□□ -0.21
COL6A6-203ENST00000511332 GNL1P36915 607 aaPredicted RBP13.74□□□□□ -0.21
COL6A6-203ENST00000511332 RAP1GAPP47736 663 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 ZNF165P49910 485 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 YWHAEP62258 255 aaKnown RBP13.74□□□□□ -0.21
COL6A6-203ENST00000511332 MRPS5P82675 430 aaKnown RBP13.74□□□□□ -0.21
COL6A6-203ENST00000511332 ADCY1Q08828 1119 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 PLD1Q13393 1074 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 CLUL1Q15846 466 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 UVSSAQ2YD98 709 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 HSP90AA4PQ58FG1 418 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 RARS2Q5T160 578 aaKnown RBP13.74□□□□□ -0.21
COL6A6-203ENST00000511332 SYCE2Q6PIF2 218 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 RNF19BQ6ZMZ0 732 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 OSTM1Q86WC4 334 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 SPPL2BQ8TCT7 592 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 TNIP3Q96KP6 325 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 NT5C1BQ96P26 610 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 TMEM209Q96SK2 561 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 SYT15Q9BQS2 421 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 CYP4F11Q9HBI6 524 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 APOBEC3GQ9HC16 384 aaKnown RBP13.74□□□□□ -0.21
COL6A6-203ENST00000511332 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL6A6-203ENST00000511332 FANCLQ9NW38 375 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 GREB1Q4ZG55 1949 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 OBSL1O75147 1896 aa13.74□□□□□ -0.21
COL6A6-203ENST00000511332 BECN2A8MW95 431 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 A8MXQ7 604 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 XYLBO75191 536 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 PAPLNO95428 1278 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 LRG1P02750 347 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 POU2F2P09086 479 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
COL6A6-203ENST00000511332 TFF2Q03403 129 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 INCA1Q0VD86 236 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 VWA3BQ502W6 1294 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 GBP6Q6ZN66 633 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 C4orf50Q6ZRC1 276 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 UNC93AQ86WB7 457 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.73□□□□□ -0.21
COL6A6-203ENST00000511332 ELMO3Q96BJ8 720 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 RIPOR3Q96MK2 946 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 NECTIN4Q96NY8 510 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 PGLYRP2Q96PD5 576 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 RHOBTB2Q9BYZ6 727 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 INTS2Q9H0H0 1204 aaKnown RBP13.73□□□□□ -0.21
COL6A6-203ENST00000511332 ADAM7Q9H2U9 754 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 NDST4Q9H3R1 872 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 ABCB6Q9NP58 842 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 ABI2Q9NYB9 513 aaPredicted RBP13.73□□□□□ -0.21
COL6A6-203ENST00000511332 PCDHB5Q9Y5E4 795 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 INSL5Q9Y5Q6 135 aa13.73□□□□□ -0.21
COL6A6-203ENST00000511332 DENND4CQ5VZ89 1909 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 MYO16Q9Y6X6 1858 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 ATP8B3O60423 1300 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 XIRP2A4UGR9 3374 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 CCDC195A0A1B0GUA6 201 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 PES1O00541 588 aaKnown RBP13.72□□□□□ -0.21
COL6A6-203ENST00000511332 MBTPS2O43462 519 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 LMO2P25791 158 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 MTHFRP42898 656 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 CDH8P55286 799 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms