RNA–Protein interactions for RNA: ENST00000511139.1

FAM172A-209, Transcript of family with sequence similarity 172 member A, human

TSL 5

Gene FAM172A, Length 310 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM172A-209	ENST00000511139	CSRNP2	Q9H175	543 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	UNC45A	Q9H3U1	944 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	MFSD1	Q9H3U5	465 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	BCAS3	Q9H6U6	928 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	IFT122	Q9HBG6	1241 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	RXFP1	Q9HBX9	757 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	KBTBD4	Q9NVX7	518 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	VPS54	Q9P1Q0	977 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	EPS15L1	Q9UBC2	864 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	KCNH3	Q9ULD8	1083 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	NOL7	Q9UMY1	257 aa	Known RBP	4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	MRPS17	Q9Y2R5	130 aa	Known RBP	4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	PCDHB2	Q9Y5E7	798 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	HCFC2	Q9Y5Z7	792 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	CEP250	Q9BV73	2442 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139	OTOGL	Q3ZCN5	2332 aa		4.89	□□□□□ -1.63
FAM172A-209	ENST00000511139		A0A087WZ62	844 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	PRAMEF27	A3QJZ7	478 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	ZNF197	O14709	1029 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	SCAMP3	O14828	347 aa	Known RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	TMPRSS2	O15393	492 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	XPOT	O43592	962 aa	Known RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	NEMF	O60524	1076 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	CLASP2	O75122	1294 aa	Known RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	OFD1	O75665	1012 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	TFE3	P19532	575 aa	Predicted RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	AVPR2	P30518	371 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	RPL9	P32969	192 aa	Known RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	PRPH	P41219	470 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	NAMPT	P43490	491 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	ASPA	P45381	313 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	GLUD2	P49448	558 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	MRE11	P49959	708 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	FANCC	Q00597	558 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	DSG1	Q02413	1049 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	FAM160A1	Q05DH4	1040 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	DSC1	Q08554	894 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	SPIRE1	Q08AE8	756 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	TMEM62	Q0P6H9	643 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	SMARCB1	Q12824	385 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	EMC2	Q15006	297 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	CALCRL	Q16602	461 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	MTERF2	Q49AM1	385 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	PAN2	Q504Q3	1202 aa	Known RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	XKR9	Q5GH70	373 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	FAM102B	Q5T8I3	360 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	SYCE2	Q6PIF2	218 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	ANO5	Q75V66	913 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	ARMC10	Q8N2F6	343 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	RNF149	Q8NC42	400 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	PHC3	Q8NDX5	983 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	FBLIM1	Q8WUP2	373 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	PRPF31	Q8WWY3	499 aa	Known RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	PHKB	Q93100	1093 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	GAL3ST3	Q96A11	431 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	RPGRIP1	Q96KN7	1286 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	FBXL18	Q96ME1	805 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	TMEM74	Q96NL1	305 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	CEP89	Q96ST8	783 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	LXN	Q9BS40	222 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	HERC2P3	Q9BVR0	1158 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	ATXN3L	Q9H3M9	355 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	TTC12	Q9H892	705 aa	Predicted RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	PLEKHA5	Q9HAU0	1116 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	UPF2	Q9HAU5	1272 aa	Known RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	WDR6	Q9NNW5	1121 aa	Known RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	METTL5	Q9NRN9	209 aa	Known RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	CHST7	Q9NS84	486 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	TBC1D13	Q9NVG8	400 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	GDE1	Q9NZC3	331 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	HSFX1	Q9UBD0	423 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	ORC3	Q9UBD5	711 aa	Predicted RBP	4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	LIMCH1	Q9UPQ0	1083 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	HIF3A	Q9Y2N7	669 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	TAF6L	Q9Y6J9	622 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	REV3L	O60673	3130 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	CLUH	O75153	1309 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	CACNA1A	O00555	2505 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	CACNA1I	Q9P0X4	2223 aa		4.88	□□□□□ -1.63
FAM172A-209	ENST00000511139	hCG_1642624	A0A1W2PR95	340 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139		H7C4K7	107 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	INO80B-WBP1	J3KQ70	363 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	ACKR2	O00590	384 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	SYN3	O14994	580 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	MGEA5	O60502	916 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	RNGTT	O60942	597 aa	Known RBP	4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	SLITRK3	O94933	977 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	GLP2R	O95838	553 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	BPNT1	O95861	308 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	PF4	P02776	101 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	TH	P07101	528 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	FURIN	P09958	794 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	SRF	P11831	508 aa		4.87	□□□□□ -1.63
FAM172A-209	ENST00000511139	MAP4	P27816	1152 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms