RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 SDE2Q6IQ49 451 aa8.71□□□□□ -1.01
HTT-208ENST00000510626 FAM45BPQ6NSW5 357 aa8.71□□□□□ -1.01
HTT-208ENST00000510626 PIK3C3Q8NEB9 887 aa8.71□□□□□ -1.01
HTT-208ENST00000510626 SDR42E1Q8WUS8 393 aa8.71□□□□□ -1.01
HTT-208ENST00000510626 MCRS1Q96EZ8 462 aa8.71□□□□□ -1.01
HTT-208ENST00000510626 OLA1Q9NTK5 396 aaKnown RBP8.71□□□□□ -1.01
HTT-208ENST00000510626 SCAF8Q9UPN6 1271 aaKnown RBP8.71□□□□□ -1.01
HTT-208ENST00000510626 RPS6KA3P51812 740 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 FAM83EQ2M2I3 478 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 SLC45A4Q5BKX6 768 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 USPL1Q5W0Q7 1092 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 NAIF1Q69YI7 327 aaPredicted RBP8.71□□□□□ -1.02
HTT-208ENST00000510626 USP13Q92995 863 aaPredicted RBP8.71□□□□□ -1.02
HTT-208ENST00000510626 PGM2Q96G03 612 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 FHDC1Q9C0D6 1143 aaPredicted RBP8.71□□□□□ -1.02
HTT-208ENST00000510626 RMND5AQ9H871 391 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 AKT3Q9Y243 479 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 MAP2K7O14733 419 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 FMO5P49326 533 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 GPC3P51654 580 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 CHN2P52757 468 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 LRRC36Q1X8D7 754 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 THNSL1Q8IYQ7 743 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 ABHD8Q96I13 439 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 C17orf80Q9BSJ5 609 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 PACSIN1Q9BY11 444 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 RMI1Q9H9A7 625 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 PLGRKTQ9HBL7 147 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 PRDM4Q9UKN5 801 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 UBAP1LF5GYI3 381 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 JAK1P23458 1154 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 ZSWIM1Q9BR11 485 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 KIF20BQ96Q89 1820 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 TRIM13O60858 407 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 PSMC6P62333 389 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 LARGE2Q8N3Y3 721 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 PTPRN2Q92932 1015 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 ZNF518BQ9C0D4 1074 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 GINS2Q9Y248 185 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 TEX33O43247 280 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 AP1G2O75843 785 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 RBP1P09455 135 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 RECQLP46063 649 aaPredicted RBP8.71□□□□□ -1.02
HTT-208ENST00000510626 ADCY1Q08828 1119 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 TBL3Q12788 808 aaKnown RBP8.71□□□□□ -1.02
HTT-208ENST00000510626 CCDC85BQ15834 202 aaPredicted RBP8.71□□□□□ -1.02
HTT-208ENST00000510626 TXNRD1Q16881 649 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 LRRC49Q8IUZ0 686 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 ZNF786Q8N393 782 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 PLA2G12BQ9BX93 195 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 OSBPL10Q9BXB5 764 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 NEURL4Q96JN8 1562 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 C15orf38-AP3S2A0A0A6YYH1 394 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 ADCY6O43306 1168 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 MYBPC2Q14324 1141 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 ARPINQ7Z6K5 226 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 ZCCHC7Q8N3Z6 543 aaKnown RBP8.71□□□□□ -1.02
HTT-208ENST00000510626 KIF2BQ8N4N8 673 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 C20orf96Q9NUD7 363 aaPredicted RBP8.71□□□□□ -1.02
HTT-208ENST00000510626 C6orf203Q9P0P8 240 aaPredicted RBP8.71□□□□□ -1.02
HTT-208ENST00000510626 CENPXA8MT69 81 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 AIM2O14862 343 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 EYA4O95677 639 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 APRTP07741 180 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 TARSP26639 723 aaKnown RBP8.71□□□□□ -1.02
HTT-208ENST00000510626 PLEKHA7Q6IQ23 1121 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 MICALL2Q8IY33 904 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 PHF11Q9UIL8 331 aa8.71□□□□□ -1.02
HTT-208ENST00000510626 SDR42E2A6NKP2 422 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 RGS4P49798 205 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 AARS2Q5JTZ9 985 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 LPCAT2Q7L5N7 544 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 AK5Q9Y6K8 562 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 USP32Q8NFA0 1604 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 GLRA3O75311 464 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 ADAMTS2O95450 1211 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 QARSP47897 775 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 SEL1L3Q68CR1 1132 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 C11orf88Q6PI97 169 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 GLYCTKQ8IVS8 523 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 CCDC60Q8IWA6 550 aaPredicted RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 TFCP2L1Q9NZI6 479 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 ATP6V1HQ9UI12 483 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 WBP11Q9Y2W2 641 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 SOAT2O75908 522 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 CSNK2BP67870 215 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 MAPRE1Q15691 268 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 SLC10A5Q5PT55 438 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 BBS2Q9BXC9 721 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 FBXO2Q9UK22 296 aaPredicted RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 MAPRE3Q9UPY8 281 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 SF3B1O75533 1304 aaKnown RBP eCLIP8.7□□□□□ -1.022e-7■■■■■ 99.1
HTT-208ENST00000510626 NCKAP1LP55160 1127 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 LRRC14Q15048 493 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 SPATS1Q496A3 300 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 GPD1LQ8N335 351 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 FIS1Q9Y3D6 152 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 MCL1Q07820 350 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 LONRF1Q17RB8 773 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 LRRC74BQ6ZQY2 392 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms