RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 IL31Q6EBC2 164 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 DHX40Q8IX18 779 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 RHOT1Q8IXI2 618 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 HSD17B14Q9BPX1 270 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 TTPALQ9BTX7 342 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 DCLK3Q9C098 648 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PCSK1NQ9UHG2 260 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 C2CD2Q9Y426 696 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 MAD1L1Q9Y6D9 718 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ADAMTS7Q9UKP4 1686 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 PGRMC1O00264 195 aaKnown RBP5.4□□□□□ -1.54
PHF3-210ENST00000509876 MAPK13O15264 365 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 SH3BP5O60239 455 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 SYNCRIPO60506 623 aaKnown RBP5.4□□□□□ -1.54
PHF3-210ENST00000509876 KIAA0754O94854 1291 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 GJA5P36382 358 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 TUSC3Q13454 348 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 DCAF6Q58WW2 860 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 MMS22LQ6ZRQ5 1243 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 ATPAF2Q8N5M1 289 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 SENP8Q96LD8 212 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 ZNF518BQ9C0D4 1074 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 KLC2Q9H0B6 622 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 NSRP1Q9H0G5 558 aaKnown RBP5.4□□□□□ -1.54
PHF3-210ENST00000509876 ZNF536O15090 1300 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 PPP1R3GB7ZBB8 358 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 ZBTB39O15060 712 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 MAP3K13O43283 966 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 SNAI1O95863 264 aaPredicted RBP5.4□□□□□ -1.54
PHF3-210ENST00000509876 RAB3IL1Q8TBN0 382 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 CPA5Q8WXQ8 436 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 MS4A4AQ96JQ5 239 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 MAGEB5Q9BZ81 275 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 CDH9Q9ULB4 789 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 TIMM13Q9Y5L4 95 aaPredicted RBP5.4□□□□□ -1.54
PHF3-210ENST00000509876 TNRC6CQ9HCJ0 1690 aaKnown RBP5.4□□□□□ -1.54
PHF3-210ENST00000509876 SMIM23A6NLE4 172 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 BAIAP3O94812 1187 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 GDF6Q6KF10 455 aaPredicted RBP5.4□□□□□ -1.54
PHF3-210ENST00000509876 ZNF771Q7L3S4 317 aaPredicted RBP5.4□□□□□ -1.54
PHF3-210ENST00000509876 SLC9A7Q96T83 725 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 HINFPQ9BQA5 517 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 CDT1Q9H211 546 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 UVRAGQ9P2Y5 699 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 CAPN11Q9UMQ6 739 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 HPSEQ9Y251 543 aa5.4□□□□□ -1.54
PHF3-210ENST00000509876 MRPS23Q9Y3D9 190 aaKnown RBP5.4□□□□□ -1.54
PHF3-210ENST00000509876 COL5A3P25940 1745 aaPredicted RBP5.4□□□□□ -1.54
PHF3-210ENST00000509876 UBR3Q6ZT12 1888 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 FOXP2O15409 715 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 CYBAP13498 195 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 KCNA4P22459 653 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 ZNF200P98182 395 aaPredicted RBP5.4□□□□□ -1.55
PHF3-210ENST00000509876 GFPT1Q06210 699 aaPredicted RBP5.4□□□□□ -1.55
PHF3-210ENST00000509876 AP1B1Q10567 949 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 STARD3Q14849 445 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 ZNF618Q5T7W0 954 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 KLHDC7AQ5VTJ3 777 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 SLC39A5Q6ZMH5 540 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 SCLYQ96I15 445 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 WNT8AQ9H1J5 351 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 PLCB1Q9NQ66 1216 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 IRAK4Q9NWZ3 460 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 RNF14Q9UBS8 474 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 SOWAHDA6NJG2 315 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 ZRANB2O95218 330 aaKnown RBP eCLIP5.4□□□□□ -1.55
PHF3-210ENST00000509876 LSM8O95777 96 aaKnown RBP5.4□□□□□ -1.55
PHF3-210ENST00000509876 ACADMP11310 421 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 GPM6BQ13491 265 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 HEATR6Q6AI08 1181 aaKnown RBP5.4□□□□□ -1.55
PHF3-210ENST00000509876 ADAT2Q7Z6V5 191 aaKnown RBP5.4□□□□□ -1.55
PHF3-210ENST00000509876 RBM23Q86U06 439 aaKnown RBP5.4□□□□□ -1.55
PHF3-210ENST00000509876 CTAGE3PQ8IX95 158 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 TMEM161BQ8NDZ6 487 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 GIPC2Q8TF65 315 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 SELENOSQ9BQE4 189 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 RRN3Q9NYV6 651 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 TRAF3IP3Q9Y228 551 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 IRS2Q9Y4H2 1338 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 A0A1W2PQJ5 194 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 PSMD3O43242 534 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 COL6A1P12109 1028 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 CYP3A5P20815 502 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 CDH6P55285 790 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 BASP1P80723 227 aaKnown RBP5.4□□□□□ -1.55
PHF3-210ENST00000509876 EFEMP1Q12805 493 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 UNC93AQ86WB7 457 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 TAB3Q8N5C8 712 aaPredicted RBP5.4□□□□□ -1.55
PHF3-210ENST00000509876 MAGOHBQ96A72 148 aaKnown RBP5.4□□□□□ -1.55
PHF3-210ENST00000509876 MRRFQ96E11 262 aaKnown RBP5.4□□□□□ -1.55
PHF3-210ENST00000509876 ARFGAP3Q9NP61 516 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 TMEM161AQ9NX61 479 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 NKIRAS1Q9NYS0 192 aa5.4□□□□□ -1.55
PHF3-210ENST00000509876 ITIH6Q6UXX5 1313 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 MAST2Q6P0Q8 1798 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 SLC12A8A0AV02 714 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 ARHGAP42A6NI28 874 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 CSH1P0DML2 217 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 CSH2P0DML3 217 aa5.39□□□□□ -1.55
PHF3-210ENST00000509876 PMLP29590 882 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms