RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 EPN2O95208 641 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 LRG1P02750 347 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 DNTTP04053 509 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 THBDP07204 575 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 RHOXF2BP0C7M4 288 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 THEGLP0DJG4 465 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 MSX2P35548 267 aaPredicted RBP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 EPS15P42566 896 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 PHKA1P46020 1223 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 NR2C2P49116 596 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 SLC12A2P55011 1212 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 ARPC4P59998 168 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 SLC25A3Q00325 362 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 GBE1Q04446 702 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 DMPKQ09013 629 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 SAFBQ15424 915 aaKnown RBP eCLIP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 GEN1Q17RS7 908 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 RNF151Q2KHN1 245 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 C5orf22Q49AR2 442 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 KRTCAP3Q53RY4 240 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 C2orf27AQ580R0 203 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 CXorf57Q6NSI4 855 aaKnown RBP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 RETSATQ6NUM9 610 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 CORO6Q6QEF8 472 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 C4orf50Q6ZRC1 276 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 IKBIPQ70UQ0 350 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 RD3Q7Z3Z2 195 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 ZNF804AQ7Z570 1209 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 PPFIBP1Q86W92 1011 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 EPHX4Q8IUS5 362 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 NRSN1Q8IZ57 195 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 Q8N9P0 234 aaPredicted RBP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 FBXO30Q8TB52 745 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 MDM1Q8TC05 714 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 UTP15Q8TED0 518 aaKnown RBP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 SMG7Q92540 1137 aaKnown RBP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 CDKL2Q92772 493 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 SLC35B4Q969S0 331 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 MFSD3Q96ES6 412 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 COG3Q96JB2 828 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 RHOXF2Q9BQY4 288 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 GPATCH1Q9BRR8 931 aaKnown RBP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 EDEM3Q9BZQ6 932 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 MROH8Q9H579 483 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 CAAP1Q9H8G2 361 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 SYNPO2LQ9H987 977 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 SEPT11Q9NVA2 429 aaKnown RBP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 AGO2Q9UKV8 859 aaKnown RBP4.91□□□□□ -1.62
NIPBL-206ENST00000509429 FGD5Q6ZNL6 1462 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 EHBP1L1Q8N3D4 1523 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 ZNF804BA4D1E1 1349 aa4.91□□□□□ -1.62
NIPBL-206ENST00000509429 POLR1AO95602 1720 aaPredicted RBP4.9□□□□□ -1.62
NIPBL-206ENST00000509429 SUPT6HQ7KZ85 1726 aaKnown RBP4.9□□□□□ -1.62
NIPBL-206ENST00000509429 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 A0A087WZG4 1122 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 CLRN2A0PK11 232 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC69A6NI79 296 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 C22orf46C9J442 243 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 AP3B1O00203 1094 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 CACNB4O00305 520 aaPredicted RBP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 ERC2O15083 957 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 PMM2O15305 246 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 FRS3O43559 492 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 TMEM127O75204 238 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 DDHD2O94830 711 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 ABLIM3O94929 683 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 SLITRK3O94933 977 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 TPM1P09493 284 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 ZNF888P0CJ79 500 aaPredicted RBP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 PCNAP12004 261 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 PRKAR1BP31321 381 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 CSTF2P33240 577 aaKnown RBP eCLIP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 PTGS2P35354 604 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 SOX5P35711 763 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 ETFBP38117 255 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 PSMD7P51665 324 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 CLCN2P51788 898 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 CASP7P55210 303 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 BASP1P80723 227 aaKnown RBP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 UBXN1Q04323 297 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 RUNX1T1Q06455 604 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 G3BP1Q13283 466 aaKnown RBP eCLIP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 SCARB2Q14108 478 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 NOLC1Q14978 699 aaKnown RBP eCLIP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 PCOLCEQ15113 449 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 PPA1Q15181 289 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC14Q49A88 953 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 ATP13A4Q4VNC1 1196 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 OTUD7BQ6GQQ9 843 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 NAA16Q6N069 864 aaPredicted RBP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 MFSD6Q6ZSS7 791 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 ENOSF1Q7L5Y1 443 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 TAOK1Q7L7X3 1001 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 ATG9AQ7Z3C6 839 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 SPATA21Q7Z572 469 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 ZBTB46Q86UZ6 589 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 LRRTM3Q86VH5 581 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 PDCL2Q8N4E4 241 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 KCTD13Q8WZ19 329 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms