RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 ABCA7Q8IZY2 2146 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 GOLGA4Q13439 2230 aaKnown RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 KALRNO60229 2985 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 hCG_1642624A0A1W2PR95 340 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 ST8SIA5O15466 376 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 DHX15O43143 795 aaKnown RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 ASAP2O43150 1006 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 GAS7O60861 476 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 MAFO75444 373 aaPredicted RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 B3GAT3O94766 335 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 KIF4AO95239 1232 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 NPTXRO95502 500 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 FGF19O95750 216 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 GP1BBP13224 206 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 JUPP14923 745 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 ATF2P15336 505 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 FGFR3P22607 806 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 ITPKAP23677 461 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 U2AF2P26368 475 aaKnown RBP eCLIP4.25□□□□□ -1.736e-8■□□□□ 9.9
RNF4-211ENST00000509206 MARCKSP29966 332 aaPredicted RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 ADSSP30520 456 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 HOXA11P31270 313 aaPredicted RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 SFNP31947 248 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 HOXD12P35452 270 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 PTGER3P43115 390 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 ALDH1A3P47895 512 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 MCM2P49736 904 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 ADCY7P51828 1080 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 JAK3P52333 1124 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 EPHB3P54753 998 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 EPHA4P54764 986 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 SETQ01105 290 aaPredicted RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 RPL6Q02878 288 aaKnown RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 PTPN13Q12923 2485 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 PLD1Q13393 1074 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 NNTQ13423 1086 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 TFDP1Q14186 410 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 LY6DQ14210 128 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 NAA30Q147X3 362 aaPredicted RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 SUZ12Q15022 739 aaKnown RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 PCBP1Q15365 356 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNF4-211ENST00000509206 PRR16Q569H4 304 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 SPDYCQ5MJ68 293 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 GPR158Q5T848 1215 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 TPGS2Q68CL5 300 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 WWC2Q6AWC2 1192 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 SLC36A4Q6YBV0 504 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 MIER3Q7Z3K6 550 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 ZNF589Q86UQ0 364 aaPredicted RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 MARCH9Q86YJ5 346 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 FMNL3Q8IVF7 1028 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 TCEAL8Q8IYN2 117 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 RNF149Q8NC42 400 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 TTC16Q8NEE8 873 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 OR2I1PQ8NGU4 316 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 PI4K2BQ8TCG2 481 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 WHAMMQ8TF30 809 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 PRPF31Q8WWY3 499 aaKnown RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 PSPC1Q8WXF1 523 aaKnown RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 NXPE2Q96DL1 559 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 RSPRY1Q96DX4 576 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 CPB2Q96IY4 423 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 CNOT6LQ96LI5 555 aaKnown RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 GCNAQ96QF7 691 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 SH2D3AQ9BRG2 576 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 NIFKQ9BYG3 293 aaKnown RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 EBF3Q9H4W6 596 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 FAM124BQ9H5Z6 455 aaPredicted RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 DCTPP1Q9H773 170 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 IFT122Q9HBG6 1241 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNF4-211ENST00000509206 RAB6BQ9NRW1 208 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 OBP2AQ9NY56 170 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 ANKMY1Q9P2S6 941 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 CACNG4Q9UBN1 327 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 SUSD2Q9UGT4 822 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 PILRBQ9UKJ0 227 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 CREBBPQ92793 2442 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 MYO9AB2RTY4 2548 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 GON4LQ3T8J9 2241 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 LAMA1P25391 3075 aa4.25□□□□□ -1.73
RNF4-211ENST00000509206 TEP1Q99973 2627 aaKnown RBP4.25□□□□□ -1.73
RNF4-211ENST00000509206 SPTAN1Q13813 2472 aaKnown RBP4.24□□□□□ -1.73
RNF4-211ENST00000509206 THADAQ6YHU6 1953 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 SMCO2A6NFE2 343 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 CCDC69A6NI79 296 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 A6NJY4 79 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 FAM86B1E9PN63 330 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 PLK4O00444 970 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 MARCH6O60337 910 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 DKC1O60832 514 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNF4-211ENST00000509206 NDUFS2O75306 463 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 ABLIM3O94929 683 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 SEC24AO95486 1093 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 AVPP01185 164 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 PRKCBP05771 671 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 FAM86B2P0C5J1 330 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 ATXN1LP0C7T5 689 aaKnown RBP4.24□□□□□ -1.73
RNF4-211ENST00000509206 CPB1P15086 417 aa4.24□□□□□ -1.73
RNF4-211ENST00000509206 MAPK1P28482 360 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms