RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 GCNT4Q9P109 453 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 MAGEC2Q9UBF1 373 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-220ENST00000508715 STK39Q9UEW8 545 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 SIK3Q9Y2K2 1263 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 HCFC2Q9Y5Z7 792 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 ANAPC1Q9H1A4 1944 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 PATJQ8NI35 1801 aa11.07□□□□□ -0.64
PTPN20-220ENST00000508715 NCOR1O75376 2440 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 A0A1B0GTH6 734 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 MYBPHLA2RUH7 354 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 LGALS16A8MUM7 142 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 BECN2A8MW95 431 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 RNF225M0QZC1 329 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-220ENST00000508715 TBX10O75333 385 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 PDGFRBP09619 1106 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 FAM163BP0C2L3 166 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 NDUFV1P49821 464 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 TNNC1P63316 161 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 FANCCQ00597 558 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 INCA1Q0VD86 236 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 ORC1Q13415 861 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 CUL2Q13617 745 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 NR1I3Q14994 352 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 EXOC3L4Q17RC7 722 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 FAM171BQ6P995 826 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 TMEM184AQ6ZMB5 413 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 RNF19BQ6ZMZ0 732 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 GBP6Q6ZN66 633 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 RRAGAQ7L523 313 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 MICALL1Q8N3F8 863 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 TTC9BQ8N6N2 239 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 EFHBQ8N7U6 833 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 SPATA18Q8TC71 538 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 ELOVL4Q9GZR5 314 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 IGFLR1Q9H665 355 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 PRDM6Q9NQX0 595 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTPN20-220ENST00000508715 TMEM30AQ9NV96 361 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 CLEC1BQ9P126 229 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 DSEQ9UL01 958 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 STXBP5LQ9Y2K9 1186 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 C5orf42Q9H799 3197 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 DENND4AQ7Z401 1863 aa11.06□□□□□ -0.64
PTPN20-220ENST00000508715 MYO10Q9HD67 2058 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 TCF20Q9UGU0 1960 aaKnown RBP11.05□□□□□ -0.64
PTPN20-220ENST00000508715 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-220ENST00000508715 OR6C75A6NL08 312 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 H7C4K7 107 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 CILPO75339 1184 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 CALCAP01258 141 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 CDK11BP21127 795 aaKnown RBP11.05□□□□□ -0.64
PTPN20-220ENST00000508715 KLRC2P26717 231 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 CA8P35219 290 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 GNL1P36915 607 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-220ENST00000508715 PBX1P40424 430 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 NDST1P52848 882 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 PSMC1P62191 440 aaKnown RBP11.05□□□□□ -0.64
PTPN20-220ENST00000508715 GPR17Q13304 367 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 INTS6LQ5JSJ4 861 aaKnown RBP11.05□□□□□ -0.64
PTPN20-220ENST00000508715 PDXDC1Q6P996 788 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 PAQR9Q6ZVX9 377 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 FAXDC2Q96IV6 333 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 NT5C1BQ96P26 610 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 ERGIC2Q96RQ1 377 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 ZSWIM1Q9BR11 485 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 ACBD6Q9BR61 282 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 NAA15Q9BXJ9 866 aaKnown RBP11.05□□□□□ -0.64
PTPN20-220ENST00000508715 RHOBTB2Q9BYZ6 727 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 GPR88Q9GZN0 384 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 GANQ9H2C0 597 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 CYP3A43Q9HB55 503 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 CISHQ9NSE2 258 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 CDH22Q9UJ99 828 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 FBXW11Q9UKB1 542 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 GTF3C4Q9UKN8 822 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 SSX2IPQ9Y2D8 614 aa11.05□□□□□ -0.64
PTPN20-220ENST00000508715 R3HCC1Q9Y3T6 440 aaKnown RBP11.05□□□□□ -0.64
PTPN20-220ENST00000508715 MTMR11A4FU01 709 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 PAPLNO95428 1278 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 ADH1AP07327 375 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 CD58P19256 250 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 LHX1P48742 406 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 RAD23BP54727 409 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 ARPP19P56211 112 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 GCNT1Q02742 428 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 SYCP1Q15431 976 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 SLC39A12Q504Y0 691 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 WDR44Q5JSH3 913 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 KLHDC7AQ5VTJ3 777 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 IQCEQ6IPM2 695 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 LLGL2Q6P1M3 1020 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 SYCE2Q6PIF2 218 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 ACOT1Q86TX2 421 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 METTL23Q86XA0 190 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 CRYBG2Q8N1P7 616 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 PPM1KQ8N3J5 372 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 C12orf76Q8N812 135 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-220ENST00000508715 SLC4A11Q8NBS3 891 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 ATAD1Q8NBU5 361 aa11.04□□□□□ -0.64
PTPN20-220ENST00000508715 OR6B3Q8NGW1 331 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms