RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SPAG1Q07617 926 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 OXA1LQ15070 435 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 STK38Q15208 465 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 CAVIN4Q5BKX8 364 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 AAGABQ6PD74 315 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 PRUNE1Q86TP1 453 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 ECHDC2Q86YB7 292 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 C7orf57Q8NEG2 295 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 OR6Y1Q8NGX8 325 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 PPP4R1Q8TF05 950 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 TRUB1Q8WWH5 349 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 ANKS1AQ92625 1134 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 BTBD6Q96KE9 485 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 SERPINB12Q96P63 405 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 TUBA1CQ9BQE3 449 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 ZBED2Q9BTP6 218 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 PABPC3Q9H361 631 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 RAD21L1Q9H4I0 556 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 ATP13A2Q9NQ11 1180 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 GPRC5DQ9NZD1 345 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 HMG20BQ9P0W2 317 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 EPS15L1Q9UBC2 864 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 CNOT7Q9UIV1 285 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 TMEM59LQ9UK28 342 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 GRID1Q9ULK0 1009 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 MAPRE3Q9UPY8 281 aa11.33□□□□□ -0.6
PDLIM5-210ENST00000508216 PLCH2O75038 1416 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 NSD3Q9BZ95 1437 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 ADGRB1O14514 1584 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 CCDC160A6NGH7 325 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 CAPN14A8MX76 684 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 F8W810 466 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 BUD23O43709 281 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 PHF2O75151 1096 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 KRT36O76013 467 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 ATG7O95352 703 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 GAS8O95995 478 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 T-ENOLP0DO92 83 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 C21orf59P57076 290 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 SNX16P57768 344 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 MGAT5Q09328 741 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 TOB2Q14106 344 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 LSM12Q3MHD2 195 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 ADCK5Q3MIX3 580 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 Q3ZCU0 254 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 KCNT1Q5JUK3 1230 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 TTC39BQ5VTQ0 682 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 MFSD5Q6N075 450 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 CYB5R4Q7L1T6 521 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 TMC3Q7Z5M5 1100 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 VSIG1Q86XK7 387 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 LARGE2Q8N3Y3 721 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 AFAP1L2Q8N4X5 818 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 METTL25Q8N6Q8 603 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 ZNF398Q8TD17 642 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 CKAP2Q8WWK9 683 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 RILPL2Q969X0 211 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 ZNF486Q96H40 463 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 PRMT1Q99873 361 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 FERMT1Q9BQL6 677 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 HOXD1Q9GZZ0 328 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 UCK1Q9HA47 277 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 S100A14Q9HCY8 104 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 IL37Q9NZH6 218 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 LIMA1Q9UHB6 759 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 ATP6V1HQ9UI12 483 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 SNX7Q9UNH6 387 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 SLC8A2Q9UPR5 921 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 SAMD9LQ8IVG5 1584 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 SALL1Q9NSC2 1324 aa11.32□□□□□ -0.6
PDLIM5-210ENST00000508216 KRBA1A5PL33 1030 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 LACTBL1A8MY62 500 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 APOL1O14791 398 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 MAPK13O15264 365 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 TEX33O43247 280 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 ONECUT3O60422 494 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 KLHL41O60662 606 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 PPP6R2O75170 966 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 GYS1P13807 737 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 PRDX6P30041 224 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 IGHMBP2P38935 993 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 SYKP43405 635 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 FOLH1Q04609 750 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 OCA2Q04671 838 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 ZNF33BQ06732 778 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 NFIAQ12857 509 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 COASYQ13057 564 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 MORC3Q14149 939 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 PDK3Q15120 406 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 DUSP7Q16829 419 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 NKAIN4Q8IVV8 208 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 CDH26Q8IXH8 852 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 TTC13Q8NBP0 860 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 TRIB2Q92519 343 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 VPS33AQ96AX1 596 aa11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 C11orf24Q96F05 449 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-210ENST00000508216 KIAA1683Q9H0B3 1180 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms