RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 NIF3L1Q9GZT8 377 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 EURLQ9NYK6 297 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 CYTH4Q9UIA0 394 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 CPSF3Q9UKF6 684 aaKnown RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 POLIQ9UNA4 740 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 SNCAIPQ9Y6H5 919 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 hCG_1818297A0A087WSY0 165 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 GOLGA8SH3BPF8 625 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 DNALI1O14645 258 aaPredicted RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 PRKCBP05771 671 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 HOXC6P09630 235 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 EDNRBP24530 442 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 CDKN2BP42772 138 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 ASPAP45381 313 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 RAP1GAPP47736 663 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 EFNA5P52803 228 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 CDH8P55286 799 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 NEDD9Q14511 834 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 STAT4Q14765 748 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 MAPK6Q16659 721 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 TFDP3Q5H9I0 405 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 DENND1BQ6P3S1 775 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 TMEM192Q8IY95 271 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 KIAA0319LQ8IZA0 1049 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 ARFGAP1Q8N6T3 406 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 CKAP2Q8WWK9 683 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 MAML1Q92585 1016 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 XYLT2Q9H1B5 865 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 LGALS13Q9UHV8 139 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 RASA4BC9J798 803 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 GOLGA8MH3BSY2 632 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 RASA4O43374 803 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 BANF1O75531 89 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 CSDE1O75534 798 aaKnown RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 OAS1P00973 400 aaKnown RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 IFNB1P01574 187 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 DYNLT1P63172 113 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 LMNB2Q03252 620 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 GAD2Q05329 585 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 TMED2Q15363 201 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 OASLQ15646 514 aaKnown RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 ZNF699Q32M78 642 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 EAPPQ56P03 285 aaPredicted RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 NOL9Q5SY16 702 aaKnown RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 IER5Q5VY09 327 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 METTL7BQ6UX53 244 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 RIOX2Q8IUF8 465 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 JOSD2Q8TAC2 188 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 MRRFQ96E11 262 aaKnown RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 SPATC1LQ9H0A9 340 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 NSRP1Q9H0G5 558 aaKnown RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 GPRC5DQ9NZD1 345 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 TPX2Q9ULW0 747 aaKnown RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 SLC12A4Q9UP95 1085 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 AGAP1Q9UPQ3 857 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 USP15Q9Y4E8 981 aaPredicted RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 POC1B-GALNT4F8VUJ3 575 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 SPAG7O75391 227 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 DNAJC8O75937 253 aaPredicted RBP11.52□□□□□ -0.57
LIN54-207ENST00000508171 LSM8O95777 96 aaKnown RBP11.52□□□□□ -0.57
LIN54-207ENST00000508171 CD19P15391 556 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 EIF4BP23588 611 aaKnown RBP11.52□□□□□ -0.57
LIN54-207ENST00000508171 STX2P32856 288 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 AP3M2P53677 418 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 MCL1Q07820 350 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 PIGHQ14442 188 aaPredicted RBP11.52□□□□□ -0.57
LIN54-207ENST00000508171 PTPN20Q4JDL3 420 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 EEF1DP3Q658K8 133 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 FAM228AQ86W67 206 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 TAB3Q8N5C8 712 aaPredicted RBP11.52□□□□□ -0.57
LIN54-207ENST00000508171 SGSM3Q96HU1 749 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 NLRP4Q96MN2 994 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 TGS1Q96RS0 853 aaKnown RBP11.52□□□□□ -0.57
LIN54-207ENST00000508171 CCDC77Q9BR77 488 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 ZWILCHQ9H900 591 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 KIF9Q9HAQ2 790 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 EXOC1LA0A1B0GW35 172 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 C3orf70A6NLC5 250 aaPredicted RBP11.52□□□□□ -0.57
LIN54-207ENST00000508171 SGK1O00141 431 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 PIAS1O75925 651 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 UBOX5O94941 541 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 KRT19P08727 400 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 IQCF3P0C7M6 154 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 TGFB3P10600 412 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 IL1R2P27930 398 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 FAM182AQ5T1J6 154 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 LRRC38Q5VT99 294 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 CDCA2Q69YH5 1023 aaPredicted RBP11.52□□□□□ -0.57
LIN54-207ENST00000508171 PPP1R2P3Q6NXS1 205 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 DRICH1Q6PGQ1 229 aaPredicted RBP11.52□□□□□ -0.57
LIN54-207ENST00000508171 GADL1Q6ZQY3 521 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 PARP9Q8IXQ6 854 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 EMC1Q8N766 993 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 GPR20Q99678 358 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 MINDY3Q9H8M7 445 aa11.52□□□□□ -0.57
LIN54-207ENST00000508171 DRG1Q9Y295 367 aaKnown RBP11.52□□□□□ -0.57
LIN54-207ENST00000508171 INO80B-WBP1J3KQ70 363 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 HGSO14964 777 aaPredicted RBP11.51□□□□□ -0.57
LIN54-207ENST00000508171 FOXN2P32314 431 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 CDH5P33151 784 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms