RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 RAD9AQ99638 391 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 NRDE2Q9H7Z3 1164 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 NAGPAQ9UK23 515 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 POLIQ9UNA4 740 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 JRKLQ9Y4A0 524 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 PPEF2O14830 753 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 DDHD2O94830 711 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 CTNNB1P35222 781 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 TMEM270Q6UE05 265 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 UROC1Q96N76 676 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 OSBPL9Q96SU4 736 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 PAAF1Q9BRP4 392 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 TSGA10Q9BZW7 698 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 CCDC172P0C7W6 258 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 TBXAS1P24557 533 aaPredicted RBP11.72□□□□□ -0.53
PROM1-207ENST00000508167 ATICP31939 592 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 FAM171A1Q5VUB5 890 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 MNS1Q8NEH6 495 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 HERVK_113Q902F9 699 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 PPP1R10Q96QC0 940 aaKnown RBP11.72□□□□□ -0.53
PROM1-207ENST00000508167 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.72□□□□□ -0.53
PROM1-207ENST00000508167 NUCKS1Q9H1E3 243 aaKnown RBP11.72□□□□□ -0.53
PROM1-207ENST00000508167 CERS4Q9HA82 394 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 ABCB6Q9NP58 842 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 FAM170AA1A519 330 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 ATP8B1O43520 1251 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 DGKIO75912 1065 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 IPO7O95373 1038 aaKnown RBP11.71□□□□□ -0.53
PROM1-207ENST00000508167 PDGFRBP09619 1106 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 CYP3A5P20815 502 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 DNAJB2P25686 324 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 RAP1GAPP47736 663 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 LONRF2Q1L5Z9 754 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 RNF10Q8N5U6 811 aaKnown RBP11.71□□□□□ -0.53
PROM1-207ENST00000508167 SENP8Q96LD8 212 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 CASD1Q96PB1 797 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 PRDM4Q9UKN5 801 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 SCN5AQ14524 2016 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 A8MXQ7 604 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 NRP1O14786 923 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 LAG3P18627 525 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 STAT1P42224 750 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 CDH8P55286 799 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 DRAP1Q14919 205 aaPredicted RBP11.71□□□□□ -0.53
PROM1-207ENST00000508167 GLYCTKQ8IVS8 523 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 MMGT1Q8N4V1 131 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 SLC28A3Q9HAS3 691 aa11.71□□□□□ -0.53
PROM1-207ENST00000508167 MKI67P46013 3256 aaKnown RBP11.71□□□□□ -0.53
PROM1-207ENST00000508167 GFPT2O94808 682 aa11.71□□□□□ -0.54
PROM1-207ENST00000508167 KCNT2Q6UVM3 1135 aa11.71□□□□□ -0.54
PROM1-207ENST00000508167 ARHGEF19Q8IW93 802 aa11.71□□□□□ -0.54
PROM1-207ENST00000508167 THEM5Q8N1Q8 247 aa11.71□□□□□ -0.54
PROM1-207ENST00000508167 TAF4BQ92750 862 aa11.71□□□□□ -0.54
PROM1-207ENST00000508167 FAM81BQ96LP2 452 aa11.71□□□□□ -0.54
PROM1-207ENST00000508167 NCANO14594 1321 aa11.71□□□□□ -0.54
PROM1-207ENST00000508167 VNN1O95497 513 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 ODC1P11926 461 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 SLC11A1P49279 550 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 LILRA4P59901 499 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 CUL2Q13617 745 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 BRD3Q15059 726 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 SCARA3Q6AZY7 606 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 ALKAL1Q6UXT8 129 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 LRRC52Q8N7C0 313 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 GSTCDQ8NEC7 633 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 TRIM58Q8NG06 486 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 ADAMTS1Q9UHI8 967 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 SIX4Q9UIU6 781 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 TARSL2A2RTX5 802 aaKnown RBP11.7□□□□□ -0.54
PROM1-207ENST00000508167 ASS1P00966 412 aaKnown RBP11.7□□□□□ -0.54
PROM1-207ENST00000508167 CLDN10P78369 228 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 ASIC2Q16515 512 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 C15orf39Q6ZRI6 1047 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 HEXIM2Q96MH2 286 aaKnown RBP11.7□□□□□ -0.54
PROM1-207ENST00000508167 SPG21Q9NZD8 308 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 KIF4AO95239 1232 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 ENPEPQ07075 957 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 C2orf54Q08AI8 447 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 ORC1Q13415 861 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 VPS36Q86VN1 386 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 PHOSPHO2Q8TCD6 241 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 KAT5Q92993 513 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 ADAM28Q9UKQ2 775 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 SF3B1O75533 1304 aaKnown RBP eCLIP11.7□□□□□ -0.54
PROM1-207ENST00000508167 KIF5AQ12840 1032 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 ELAVL2Q12926 359 aaKnown RBP11.7□□□□□ -0.54
PROM1-207ENST00000508167 DCAF12L1Q5VU92 463 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 WSCD1Q658N2 575 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 TMC7Q7Z402 723 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 KIAA1328Q86T90 577 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 CMTR2Q8IYT2 770 aaKnown RBP11.7□□□□□ -0.54
PROM1-207ENST00000508167 ADGRF2Q8IZF7 708 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 MED10Q9BTT4 135 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 SMYD3Q9H7B4 428 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 TAS2R14Q9NYV8 317 aa11.7□□□□□ -0.54
PROM1-207ENST00000508167 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.69□□□□□ -0.54
PROM1-207ENST00000508167 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.69□□□□□ -0.54
PROM1-207ENST00000508167 PALMO75781 387 aa11.69□□□□□ -0.54
PROM1-207ENST00000508167 GALTP07902 379 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms