RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ELF2Q15723 593 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 PKN2Q16513 984 aaKnown RBP7.71□□□□□ -1.18
CLCN3-206ENST00000507875 TMEM177Q53S58 311 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 KIAA1614Q5VZ46 1190 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 SNRNP48Q6IEG0 339 aaKnown RBP7.71□□□□□ -1.18
CLCN3-206ENST00000507875 GPAT2Q6NUI2 795 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 SWSAP1Q6NVH7 229 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 USP17L6PQ6QN14 398 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 RNF207Q6ZRF8 634 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 MAMDC2Q7Z304 686 aaPredicted RBP7.71□□□□□ -1.18
CLCN3-206ENST00000507875 DHX40Q8IX18 779 aaKnown RBP7.71□□□□□ -1.18
CLCN3-206ENST00000507875 TRIML1Q8N9V2 468 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 IQUBQ8NA54 791 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 CLMNQ96JQ2 1002 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 CSRNP2Q9H175 543 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 ASCC2Q9H1I8 757 aaPredicted RBP7.71□□□□□ -1.18
CLCN3-206ENST00000507875 OXSMQ9NWU1 459 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 RRN3Q9NYV6 651 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 STK17AQ9UEE5 414 aa7.71□□□□□ -1.18
CLCN3-206ENST00000507875 MAGED1Q9Y5V3 778 aaPredicted RBP7.71□□□□□ -1.18
CLCN3-206ENST00000507875 SNX2O60749 519 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 PQBP1O60828 265 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 CCDC172P0C7W6 258 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 LSSP48449 732 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 KPNA1P52294 538 aaPredicted RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 YARSP54577 528 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 HERVK_113P62684 666 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 PPP2R5CQ13362 524 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 TMEM132BQ14DG7 1078 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 ZRSR1Q15695 479 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 HYIQ5T013 277 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 CTU1Q7Z7A3 348 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 DDX53Q86TM3 631 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 PCDH19Q8TAB3 1148 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 ERMNQ8TAM6 284 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 SYTL5Q8TDW5 730 aaPredicted RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 DIS3LQ8TF46 1054 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 CALML4Q96GE6 196 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 CCDC74BQ96LY2 380 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 CCDC138Q96M89 665 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 RIT2Q99578 217 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 ORAI3Q9BRQ5 295 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 WDR11Q9BZH6 1224 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 MCOLN1Q9GZU1 580 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 NT5C3AQ9H0P0 336 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 KCNF1Q9H3M0 494 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 MORF4L1Q9UBU8 362 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 EDARQ9UNE0 448 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 FZD1Q9UP38 647 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 SLC4A7Q9Y6M7 1214 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 A0A087WWV3 80 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 VWA3AA6NCI4 1184 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 MEIS1O00470 390 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 ADAMTS3O15072 1205 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 KIF1CO43896 1103 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 KIF5CO60282 957 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 KRT37O76014 449 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 TBC1D8O95759 1140 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 SLFN14P0C7P3 912 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 CCND2P30279 289 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 UBA7P41226 1012 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 PRIM2P49643 509 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 HSD17B7P56937 341 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 SLBPQ14493 270 aaKnown RBP eCLIP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 NOLC1Q14978 699 aaKnown RBP eCLIP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 TREML2Q5T2D2 321 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 LILRA6Q6PI73 481 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 ABRAQ8N0Z2 381 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 PPHLN1Q8NEY8 458 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 NSUN6Q8TEA1 469 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 PPP1R13LQ8WUF5 828 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 RIN2Q8WYP3 895 aaPredicted RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 CLIC6Q96NY7 704 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 PARK7Q99497 189 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 BPIFA3Q9BQP9 254 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 MXRA8Q9BRK3 442 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 SPATC1LQ9H0A9 340 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 GBP3Q9H0R5 595 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 PPARGC1AQ9UBK2 798 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 ADD3Q9UEY8 706 aaKnown RBP7.7□□□□□ -1.18
CLCN3-206ENST00000507875 PCDHA12Q9UN75 941 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 PCDHA11Q9Y5I1 949 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 UBIAD1Q9Y5Z9 338 aa7.7□□□□□ -1.18
CLCN3-206ENST00000507875 MGAMO43451 1857 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 EDIL3O43854 480 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 FKTNO75072 461 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 TPPPO94811 219 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 SMC2O95347 1197 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 ABCB4P21439 1286 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 SNAP25P60880 206 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 MAP4K2Q12851 820 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 LAMC2Q13753 1193 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 ARHGEF6Q15052 776 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 KIAA0753Q2KHM9 967 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 DPCR1Q3MIW9 517 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 CEP55Q53EZ4 464 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 HAUS3Q68CZ6 603 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 SCARA3Q6AZY7 606 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 PSAPL1Q6NUJ1 521 aa7.69□□□□□ -1.18
CLCN3-206ENST00000507875 GPR155Q7Z3F1 870 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms