RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 HABP2Q14520 560 aaPredicted RBP5.99□□□□□ -1.45
LINC01088-203ENST00000507476 PCBP2Q15366 365 aaKnown RBP eCLIP5.99□□□□□ -1.45
LINC01088-203ENST00000507476 MTX3Q5HYI7 312 aa5.99□□□□□ -1.45
LINC01088-203ENST00000507476 SUMO4Q6EEV6 95 aa5.99□□□□□ -1.45
LINC01088-203ENST00000507476 GPR35Q9HC97 309 aa5.99□□□□□ -1.45
LINC01088-203ENST00000507476 SERTAD4Q9NUC0 356 aa5.99□□□□□ -1.45
LINC01088-203ENST00000507476 RLIMQ9NVW2 624 aa5.99□□□□□ -1.45
LINC01088-203ENST00000507476 TRHDEQ9UKU6 1024 aa5.99□□□□□ -1.45
LINC01088-203ENST00000507476 AGAP1Q9UPQ3 857 aa5.99□□□□□ -1.45
LINC01088-203ENST00000507476 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.99□□□□□ -1.45
LINC01088-203ENST00000507476 CFAP20Q9Y6A4 193 aaKnown RBP5.99□□□□□ -1.45
LINC01088-203ENST00000507476 LRRC14BA6NHZ5 514 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 PRR35P0CG20 571 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 CHRM3P20309 590 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 ZNF135P52742 658 aaPredicted RBP5.98□□□□□ -1.45
LINC01088-203ENST00000507476 KRT85P78386 507 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 TCF15Q12870 199 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 RBM20Q5T481 1227 aaKnown RBP5.98□□□□□ -1.45
LINC01088-203ENST00000507476 ZNF626Q68DY1 528 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 C11orf87Q6NUJ2 197 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 ZNF66Q6ZN08 573 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 TTC7BQ86TV6 843 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 FAM109AQ8N4B1 249 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 PRPF38AQ8NAV1 312 aaKnown RBP5.98□□□□□ -1.45
LINC01088-203ENST00000507476 SPC25Q9HBM1 224 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 MAN1C1Q9NR34 630 aa5.98□□□□□ -1.45
LINC01088-203ENST00000507476 CHEK2O96017 543 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 S100BP04271 92 aaPredicted RBP5.97□□□□□ -1.45
LINC01088-203ENST00000507476 FXR1P51114 621 aaKnown RBP eCLIP5.97□□□□□ -1.45
LINC01088-203ENST00000507476 BMPR2Q13873 1038 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 TBCCQ15814 346 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 UAP1L1Q3KQV9 507 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 VPS53Q5VIR6 699 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 CCAR1Q8IX12 1150 aaKnown RBP5.97□□□□□ -1.45
LINC01088-203ENST00000507476 EXOC8Q8IYI6 725 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 MORC4Q8TE76 937 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 REPS1Q96D71 796 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 CNPPD1Q9BV87 410 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 C1orf43Q9BWL3 253 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 CCDC8Q9H0W5 538 aaPredicted RBP5.97□□□□□ -1.45
LINC01088-203ENST00000507476 TMX1Q9H3N1 280 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 SERHLQ9NQF3 203 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 CFAP97Q9P2B7 532 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 ATP8A1Q9Y2Q0 1164 aa5.97□□□□□ -1.45
LINC01088-203ENST00000507476 LOC102724159A0A0B4J2E5 919 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 VPS4BO75351 444 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 KIF20AO95235 890 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 RPLP2P05387 115 aaKnown RBP5.96□□□□□ -1.46
LINC01088-203ENST00000507476 PDHA1P08559 390 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 GNAI3P08754 354 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 NHLRC4P0CG21 123 aaPredicted RBP5.96□□□□□ -1.46
LINC01088-203ENST00000507476 PHKA1P46020 1223 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 GNAI1P63096 354 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 MTMR1Q13613 665 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 KLF9Q13886 244 aaPredicted RBP5.96□□□□□ -1.46
LINC01088-203ENST00000507476 PWP2Q15269 919 aaKnown RBP5.96□□□□□ -1.46
LINC01088-203ENST00000507476 PLAC9Q5JTB6 97 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 ZNF551Q7Z340 670 aaPredicted RBP5.96□□□□□ -1.46
LINC01088-203ENST00000507476 PPP1R32Q7Z5V6 425 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 FAM90A1Q86YD7 464 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 KLHDC4Q8TBB5 520 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 FAM136AQ96C01 138 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 SLAMF7Q9NQ25 335 aa5.96□□□□□ -1.46
LINC01088-203ENST00000507476 SHTN1A0MZ66 631 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 GABRDO14764 452 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 ZNF213O14771 459 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 SOAT2O75908 522 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 ITGALP20701 1170 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 KELP23276 732 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 PRDX5P30044 214 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 CD6P30203 668 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 ADKP55263 362 aaKnown RBP5.95□□□□□ -1.46
LINC01088-203ENST00000507476 MAPK7Q13164 816 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 KIF22Q14807 665 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 ODF1Q14990 250 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 PROSER3Q2NL68 480 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 ARHGEF3Q9NR81 526 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 GNL3LQ9NVN8 582 aaKnown RBP5.95□□□□□ -1.46
LINC01088-203ENST00000507476 BTBD3Q9Y2F9 522 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 MRFAP1Q9Y605 127 aa5.95□□□□□ -1.46
LINC01088-203ENST00000507476 HMGB1P1B2RPK0 211 aaPredicted RBP5.94□□□□□ -1.46
LINC01088-203ENST00000507476 RARBP10826 455 aa5.94□□□□□ -1.46
LINC01088-203ENST00000507476 SMARCA1P28370 1054 aa5.94□□□□□ -1.46
LINC01088-203ENST00000507476 EPHB2P29323 1055 aa5.94□□□□□ -1.46
LINC01088-203ENST00000507476 PIK3CGP48736 1102 aa5.94□□□□□ -1.46
LINC01088-203ENST00000507476 BOP1Q14137 746 aaKnown RBP5.94□□□□□ -1.46
LINC01088-203ENST00000507476 SLC44A4Q53GD3 710 aa5.94□□□□□ -1.46
LINC01088-203ENST00000507476 CEP85Q6P2H3 762 aa5.94□□□□□ -1.46
LINC01088-203ENST00000507476 SEMA4CQ9C0C4 833 aa5.94□□□□□ -1.46
LINC01088-203ENST00000507476 TINAGL1Q9GZM7 467 aaPredicted RBP5.94□□□□□ -1.46
LINC01088-203ENST00000507476 PCDH12Q9NPG4 1184 aa5.94□□□□□ -1.46
LINC01088-203ENST00000507476 SH3BP4Q9P0V3 963 aa5.94□□□□□ -1.46
LINC01088-203ENST00000507476 RAD54BQ9Y620 910 aa5.94□□□□□ -1.46
LINC01088-203ENST00000507476 TISP43B9A030 160 aa5.93□□□□□ -1.46
LINC01088-203ENST00000507476 PPM1DO15297 605 aa5.93□□□□□ -1.46
LINC01088-203ENST00000507476 PEX14O75381 377 aa5.93□□□□□ -1.46
LINC01088-203ENST00000507476 PARNO95453 639 aaKnown RBP5.93□□□□□ -1.46
LINC01088-203ENST00000507476 MPGP29372 298 aa5.93□□□□□ -1.46
LINC01088-203ENST00000507476 GCLCP48506 637 aaPredicted RBP5.93□□□□□ -1.46
LINC01088-203ENST00000507476 ITKQ08881 620 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms