RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 CES5AQ6NT32 575 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 C11orf57Q6ZUT1 292 aaPredicted RBP19.47■□□□□ 0.71
NPHP4-210ENST00000506941 TCEAL8Q8IYN2 117 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 TTC9BQ8N6N2 239 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 TAF4BQ92750 862 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 PKMYT1Q99640 499 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 SDCBP2Q9H190 292 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 TMLHEQ9NVH6 421 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 TRIOO75962 3097 aa19.47■□□□□ 0.71
NPHP4-210ENST00000506941 TTC28Q96AY4 2481 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 TACC1O75410 805 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 CLSTN1O94985 981 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 GNA14O95837 355 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 ASPAP45381 313 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 LHX1P48742 406 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 FMO5P49326 533 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 CDH8P55286 799 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 NOP14P78316 857 aaKnown RBP19.46■□□□□ 0.71
NPHP4-210ENST00000506941 MYL7Q01449 175 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 CBX2Q14781 532 aaPredicted RBP19.46■□□□□ 0.71
NPHP4-210ENST00000506941 UVSSAQ2YD98 709 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 PPM1LQ5SGD2 360 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 SASS6Q6UVJ0 657 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 ATAD1Q8NBU5 361 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 FBXL13Q8NEE6 735 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 CNOT6LQ96LI5 555 aaKnown RBP19.46■□□□□ 0.71
NPHP4-210ENST00000506941 ACBD6Q9BR61 282 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 PRKD2Q9BZL6 878 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 POMKQ9H5K3 350 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 CYP4F11Q9HBI6 524 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 COQ4Q9Y3A0 265 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 INSL5Q9Y5Q6 135 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 MYO10Q9HD67 2058 aa19.46■□□□□ 0.71
NPHP4-210ENST00000506941 PRRG1O14668 218 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 CCL16O15467 120 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 ATP2C2O75185 946 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 FGFR1OPO95684 399 aaKnown RBP19.45■□□□□ 0.7
NPHP4-210ENST00000506941 HNRNPA1P09651 372 aaKnown RBP eCLIP19.45■□□□□ 0.7
NPHP4-210ENST00000506941 HOXA9P31269 272 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 TSPY1Q01534 308 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 STX1AQ16623 288 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 CT47A1Q5JQC4 288 aaPredicted RBP19.45■□□□□ 0.7
NPHP4-210ENST00000506941 INTS6LQ5JSJ4 861 aaKnown RBP19.45■□□□□ 0.7
NPHP4-210ENST00000506941 CCDC149Q6ZUS6 474 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 ADAMTS19Q8TE59 1207 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 SMG7Q92540 1137 aaKnown RBP19.45■□□□□ 0.7
NPHP4-210ENST00000506941 NECAB3Q96P71 396 aaPredicted RBP19.45■□□□□ 0.7
NPHP4-210ENST00000506941 RHOBTB2Q9BYZ6 727 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 RAB20Q9NX57 234 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 MAFFQ9ULX9 164 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 FAM50BQ9Y247 325 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 PATJQ8NI35 1801 aa19.45■□□□□ 0.7
NPHP4-210ENST00000506941 PDGFRBP09619 1106 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 CCDC192P0DO97 292 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 PCSK1P29120 753 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 ELF1P32519 619 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 MTHFRP42898 656 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 PSMC1P62191 440 aaKnown RBP19.44■□□□□ 0.7
NPHP4-210ENST00000506941 TYRO3Q06418 890 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 DUSP4Q13115 394 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 RTL10Q7L3V2 364 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 RIPOR3Q96MK2 946 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 SYT15Q9BQS2 421 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 BCO2Q9BYV7 579 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 IMPG2Q9BZV3 1241 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 SNX25Q9H3E2 840 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 DPEP3Q9H4B8 488 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 THAP9Q9H5L6 903 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 CRTAC1Q9NQ79 661 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 ANO10Q9NW15 660 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 SLC27A5Q9Y2P5 690 aa19.44■□□□□ 0.7
NPHP4-210ENST00000506941 MYBPHLA2RUH7 354 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 SOAT2O75908 522 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 POU2F2P09086 479 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 FAM163BP0C2L3 166 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 PTMSP20962 102 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 GNL1P36915 607 aaPredicted RBP19.43■□□□□ 0.7
NPHP4-210ENST00000506941 ZP2Q05996 745 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 KCNH2Q12809 1159 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 TPD52L1Q16890 204 aaPredicted RBP19.43■□□□□ 0.7
NPHP4-210ENST00000506941 HSP90AA4PQ58FG1 418 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 ATAT1Q5SQI0 421 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 DCP1BQ8IZD4 617 aaKnown RBP19.43■□□□□ 0.7
NPHP4-210ENST00000506941 OR6B3Q8NGW1 331 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 NECTIN4Q96NY8 510 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 LPIN3Q9BQK8 851 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 NIF3L1Q9GZT8 377 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 DNAJC25Q9H1X3 360 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 HCFC1R1Q9NWW0 138 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 GTF3C4Q9UKN8 822 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 CDH9Q9ULB4 789 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 YIPF1Q9Y548 306 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.43■□□□□ 0.7
NPHP4-210ENST00000506941 ANAPC1Q9H1A4 1944 aa19.43■□□□□ 0.7
NPHP4-210ENST00000506941 PMM2O15305 246 aa19.42■□□□□ 0.7
NPHP4-210ENST00000506941 P4HA1P13674 534 aa19.42■□□□□ 0.7
NPHP4-210ENST00000506941 TWF1Q12792 350 aa19.42■□□□□ 0.7
NPHP4-210ENST00000506941 FAM171BQ6P995 826 aa19.42■□□□□ 0.7
NPHP4-210ENST00000506941 CYP26C1Q6V0L0 522 aa19.42■□□□□ 0.7
NPHP4-210ENST00000506941 TATDN2Q93075 761 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms