RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 KRT14P02533 472 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 RFC1P35251 1148 aaPredicted RBP12.92□□□□□ -0.34
LIN54-206ENST00000506560 AFF1P51825 1210 aaKnown RBP12.92□□□□□ -0.34
LIN54-206ENST00000506560 CCDC142Q17RM4 750 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 ZNF618Q5T7W0 954 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 NOTUMQ6P988 496 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 CCDC137Q6PK04 289 aaKnown RBP12.92□□□□□ -0.34
LIN54-206ENST00000506560 PRUNE1Q86TP1 453 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 OR2W6PQ8NHA6 318 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 RUBCNQ92622 972 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 TRIM11Q96F44 468 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 TMEM176AQ96HP8 235 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 HEXIM2Q96MH2 286 aaKnown RBP12.92□□□□□ -0.34
LIN54-206ENST00000506560 VIPAS39Q9H9C1 493 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 PCDHGC3Q9UN70 934 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 MKI67P46013 3256 aaKnown RBP12.92□□□□□ -0.34
LIN54-206ENST00000506560 C17orf102A2RUQ5 167 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 M0QYV0 167 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 RALAP11233 206 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 CYBAP13498 195 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 KRT10P13645 584 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 CDH5P33151 784 aaPredicted RBP12.92□□□□□ -0.34
LIN54-206ENST00000506560 AARSP49588 968 aaKnown RBP eCLIP12.92□□□□□ -0.34
LIN54-206ENST00000506560 UAP1Q16222 522 aaPredicted RBP12.92□□□□□ -0.34
LIN54-206ENST00000506560 PPP1R15BQ5SWA1 713 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 DNAJC24Q6P3W2 148 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 CCDC50Q8IVM0 306 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 ARFGAP1Q8N6T3 406 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 C7orf31Q8N865 590 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 CCDC26Q8TAB7 109 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 SOCS4Q8WXH5 440 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 ARL8AQ96BM9 186 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 VCPIP1Q96JH7 1222 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 TRIM6Q9C030 488 aaPredicted RBP12.92□□□□□ -0.34
LIN54-206ENST00000506560 FAM49BQ9NUQ9 324 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 PARVAQ9NVD7 372 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 GOLGA6L10A0A0M3HER8 536 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 SPTLC1O15269 473 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 AKR1A1P14550 325 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 ELNP15502 786 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 RBP5P82980 135 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 PPARDQ03181 441 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 FAM182AQ5T1J6 154 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 ZFP42Q96MM3 310 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 DPEP3Q9H4B8 488 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 PARP2Q9UGN5 583 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 ITGA11Q9UKX5 1188 aa12.92□□□□□ -0.34
LIN54-206ENST00000506560 CA12O43570 354 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 IBSPP21815 317 aaPredicted RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 TRIP13Q15645 432 aaPredicted RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 ZBTB6Q15916 424 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 NBPF20Q3BBV1 942 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 DCAF4L1Q3SXM0 396 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 DUPD1Q68J44 220 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 GDF6Q6KF10 455 aaPredicted RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 DCUN1D2Q6PH85 259 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 ALKAL1Q6UXT8 129 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 MAATS1Q7Z4T9 603 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 ACOT1Q86TX2 421 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 SEC14L1Q92503 715 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 VRTNQ9H8Y1 702 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 MRPL47Q9HD33 250 aaKnown RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 ADAM21Q9UKJ8 722 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.91□□□□□ -0.34
LIN54-206ENST00000506560 SCN10AQ9Y5Y9 1956 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 FSCN2O14926 492 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 LSM8O95777 96 aaKnown RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 COILP38432 576 aaPredicted RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 RPL21P46778 160 aaKnown RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 RGS7P49802 495 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 SMTNL2Q2TAL5 461 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 FAM228AQ86W67 206 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 SMG8Q8ND04 991 aaKnown RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 NAP1L3Q99457 506 aaPredicted RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 ERP44Q9BS26 406 aa12.91□□□□□ -0.34
LIN54-206ENST00000506560 UTP11Q9Y3A2 253 aaKnown RBP12.91□□□□□ -0.34
LIN54-206ENST00000506560 SMIM28A0A1B0GU29 152 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 CALB1P05937 261 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 PFKMP08237 780 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 GPD2P43304 727 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 PSMC1P62191 440 aaKnown RBP12.9□□□□□ -0.34
LIN54-206ENST00000506560 FAM47CQ5HY64 1035 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 SH3PXD2AQ5TCZ1 1133 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 KAZNQ674X7 775 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 TRNP1Q6NT89 227 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 ZDHHC24Q6UX98 284 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 CCDC105Q8IYK2 499 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 FBXO25Q8TCJ0 367 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 RAPGEF5Q92565 580 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 METTL5Q9NRN9 209 aaKnown RBP12.9□□□□□ -0.34
LIN54-206ENST00000506560 GRHL1Q9NZI5 618 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 BARX2Q9UMQ3 279 aaPredicted RBP12.9□□□□□ -0.34
LIN54-206ENST00000506560 SCINQ9Y6U3 715 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 DUSP11O75319 330 aaKnown RBP12.9□□□□□ -0.34
LIN54-206ENST00000506560 GRAP2O75791 330 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 IL1R2P27930 398 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 HOXC8P31273 242 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 ATICP31939 592 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 SLC1A1P43005 524 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms