RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 BIRC3Q13489 604 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 SMAD2Q15796 467 aaKnown RBP7.81□□□□□ -1.16
GYPB-206ENST00000506516 ZCWPW2Q504Y3 356 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 RARS2Q5T160 578 aaKnown RBP7.81□□□□□ -1.16
GYPB-206ENST00000506516 TPGS2Q68CL5 300 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 LMBRD2Q68DH5 695 aaPredicted RBP7.81□□□□□ -1.16
GYPB-206ENST00000506516 SLC8B1Q6J4K2 584 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 TMC5Q6UXY8 1006 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 C15orf39Q6ZRI6 1047 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 SPATA31D4Q6ZUB0 917 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 CCDC149Q6ZUS6 474 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 TMEM86AQ8N2M4 240 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 TMEM130Q8N3G9 435 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 C12orf76Q8N812 135 aaPredicted RBP7.81□□□□□ -1.16
GYPB-206ENST00000506516 SMRP1Q8NCR6 262 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 CMASQ8NFW8 434 aaPredicted RBP7.81□□□□□ -1.16
GYPB-206ENST00000506516 SYAP1Q96A49 352 aaPredicted RBP7.81□□□□□ -1.16
GYPB-206ENST00000506516 BORCS6Q96GS4 357 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 HPDLQ96IR7 371 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 MKNK1Q9BUB5 465 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 APOL5Q9BWW9 433 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 NUP62CLQ9H1M0 184 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 S1PR5Q9H228 398 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 CLSTN2Q9H4D0 955 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 PIDD1Q9HB75 910 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 EVA1BQ9NVM1 165 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 ZDHHC7Q9NXF8 308 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 GDAP2Q9NXN4 497 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 PRKAG3Q9UGI9 489 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 FBXL5Q9UKA1 691 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 SNX9Q9Y5X1 595 aa7.81□□□□□ -1.16
GYPB-206ENST00000506516 LRRIQ3A6PVS8 624 aaPredicted RBP7.8□□□□□ -1.16
GYPB-206ENST00000506516 ADAM12O43184 909 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 AKAP3O75969 853 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 ABLIM3O94929 683 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 CLSTN1O94985 981 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 MBD3O95983 291 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 C4BPAP04003 597 aaKnown RBP7.8□□□□□ -1.16
GYPB-206ENST00000506516 C8AP07357 584 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 HNRNPA1P09651 372 aaKnown RBP eCLIP7.8□□□□□ -1.16
GYPB-206ENST00000506516 FAM163BP0C2L3 166 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 CPB1P15086 417 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 IL9P15248 144 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 ATF2P15336 505 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 LHX1P48742 406 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 TNNC1P63316 161 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 MYL7Q01449 175 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 ROR1Q01973 937 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 KCNH2Q12809 1159 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 GPR17Q13304 367 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 CBX2Q14781 532 aaPredicted RBP7.8□□□□□ -1.16
GYPB-206ENST00000506516 SGSM1Q2NKQ1 1148 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 PPM1LQ5SGD2 360 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 KLHL10Q6JEL2 608 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 FOXR2Q6PJQ5 311 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 RSPO2Q6UXX9 243 aaPredicted RBP7.8□□□□□ -1.16
GYPB-206ENST00000506516 FILIP1Q7Z7B0 1213 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 GPR149Q86SP6 731 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 DCP1BQ8IZD4 617 aaKnown RBP7.8□□□□□ -1.16
GYPB-206ENST00000506516 TOP6BLQ8N6T0 577 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 MLKLQ8NB16 471 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 CCDC150Q8NCX0 1101 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 SPATA18Q8TC71 538 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 ADAMTS19Q8TE59 1207 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 NELFBQ8WX92 580 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 MMS19Q96T76 1030 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 UHRF1Q96T88 793 aaPredicted RBP7.8□□□□□ -1.16
GYPB-206ENST00000506516 PHF7Q9BWX1 381 aaPredicted RBP7.8□□□□□ -1.16
GYPB-206ENST00000506516 RHOBTB2Q9BYZ6 727 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 PRKD2Q9BZL6 878 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 CYP4F11Q9HBI6 524 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 METTL14Q9HCE5 456 aaKnown RBP7.8□□□□□ -1.16
GYPB-206ENST00000506516 AFF4Q9UHB7 1163 aaKnown RBP7.8□□□□□ -1.16
GYPB-206ENST00000506516 DACH1Q9UI36 760 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 FKBPLQ9UIM3 349 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 SIX4Q9UIU6 781 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 FBXW11Q9UKB1 542 aa7.8□□□□□ -1.16
GYPB-206ENST00000506516 USP15Q9Y4E8 981 aaPredicted RBP7.8□□□□□ -1.16
GYPB-206ENST00000506516 PTPRJQ12913 1337 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 MYO9BQ13459 2157 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 WDR27A2RRH5 827 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 PRRG1O14668 218 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 SLC16A3O15427 465 aaKnown RBP7.79□□□□□ -1.16
GYPB-206ENST00000506516 XYLBO75191 536 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 STAU1O95793 577 aaKnown RBP7.79□□□□□ -1.16
GYPB-206ENST00000506516 GNA14O95837 355 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 LRG1P02750 347 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 P4HA1P13674 534 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 BMP6P22004 513 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 HOXA9P31269 272 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 GTF2H1P32780 548 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 GNL1P36915 607 aaPredicted RBP7.79□□□□□ -1.16
GYPB-206ENST00000506516 TUFMP49411 452 aaKnown RBP7.79□□□□□ -1.16
GYPB-206ENST00000506516 DLG4P78352 724 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 TSPY1Q01534 308 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 ADCY1Q08828 1119 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 SMARCB1Q12824 385 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 PAK1Q13153 545 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 NCOA4Q13772 614 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms