RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 GCLMP48507 274 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 ZNF280DQ6N043 979 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 CAVIN1Q6NZI2 390 aaKnown RBP18.1■□□□□ 0.49
SYNE4-207ENST00000505054 SV2AQ7L0J3 742 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 FILIP1Q7Z7B0 1213 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 USP37Q86T82 979 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 XYLT2Q9H1B5 865 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 GDAP2Q9NXN4 497 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 EPS15L1Q9UBC2 864 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 WNT16Q9UBV4 365 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 FBXL5Q9UKA1 691 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 L1RE1Q9UN81 338 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 CDY1Q9Y6F8 540 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 FANCMQ8IYD8 2048 aa18.1■□□□□ 0.49
SYNE4-207ENST00000505054 H7C4K7 107 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 TGM5O43548 720 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 PHACTR2O75167 634 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 PAPLNO95428 1278 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 OR1D2P34982 312 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 MYL6P60660 151 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 YWHAHQ04917 246 aaPredicted RBP18.09■□□□□ 0.49
SYNE4-207ENST00000505054 MYO1EQ12965 1108 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 KLHL40Q2TBA0 621 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 CTXN3Q4LDR2 81 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 WSCD1Q658N2 575 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 SLC8B1Q6J4K2 584 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 LILRA6Q6PI73 481 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 ERMP1Q7Z2K6 904 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 PALB2Q86YC2 1186 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 HDAC7Q8WUI4 952 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 ARMCX3Q9UH62 379 aaPredicted RBP18.09■□□□□ 0.49
SYNE4-207ENST00000505054 R3HCC1Q9Y3T6 440 aaKnown RBP18.09■□□□□ 0.49
SYNE4-207ENST00000505054 SNX9Q9Y5X1 595 aa18.09■□□□□ 0.49
SYNE4-207ENST00000505054 MIA3Q5JRA6 1907 aa18.08■□□□□ 0.49
SYNE4-207ENST00000505054 ARHGEF37A1IGU5 675 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 STAU1O95793 577 aaKnown RBP18.08■□□□□ 0.48
SYNE4-207ENST00000505054 C1RP00736 705 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 CFHP08603 1231 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 ROR1Q01973 937 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 TRPC3Q13507 836 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 NCOA4Q13772 614 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 RAB33AQ14088 237 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 OVOS1Q6IE37 1185 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 LIMS2Q7Z4I7 341 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 PDCL2Q8N4E4 241 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 SMG7Q92540 1137 aaKnown RBP18.08■□□□□ 0.48
SYNE4-207ENST00000505054 NXPE3Q969Y0 559 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 SLC35C1Q96A29 364 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 SRRTQ9BXP5 876 aaKnown RBP18.08■□□□□ 0.48
SYNE4-207ENST00000505054 MMRN2Q9H8L6 949 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 DACH1Q9UI36 760 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 DSEQ9UL01 958 aa18.08■□□□□ 0.48
SYNE4-207ENST00000505054 KRBA1A5PL33 1030 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 HUS1O60921 280 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 RFPL2O75678 378 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 HLA-DRAP01903 254 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 SPATA31D3P0C874 917 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 SRFP11831 508 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 PTMSP20962 102 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 RFX1P22670 979 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 ERCC5P28715 1186 aaPredicted RBP18.07■□□□□ 0.48
SYNE4-207ENST00000505054 ATICP31939 592 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 GTF2H1P32780 548 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 SOWAHAQ2M3V2 549 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 CCDC40Q4G0X9 1142 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 DCAF17Q5H9S7 520 aaPredicted RBP18.07■□□□□ 0.48
SYNE4-207ENST00000505054 SPATA31D4Q6ZUB0 917 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 OR10T2Q8NGX3 314 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 TAS1R2Q8TE23 839 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 RSAD2Q8WXG1 361 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 ELMO3Q96BJ8 720 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 ZNF707Q96C28 371 aaPredicted RBP18.07■□□□□ 0.48
SYNE4-207ENST00000505054 MYADMQ96S97 322 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 PLEKHA4Q9H4M7 779 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 VRTNQ9H8Y1 702 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 METTL14Q9HCE5 456 aaKnown RBP18.07■□□□□ 0.48
SYNE4-207ENST00000505054 TMEM8AQ9HCN3 771 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 ZDHHC7Q9NXF8 308 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 FBXW11Q9UKB1 542 aa18.07■□□□□ 0.48
SYNE4-207ENST00000505054 WDR27A2RRH5 827 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 PIK3CAP42336 1068 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 ID4P47928 161 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 MARSP56192 900 aaKnown RBP18.06■□□□□ 0.48
SYNE4-207ENST00000505054 ARPP19P56211 112 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 CBWD6Q4V339 395 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 CBWD3Q5JTY5 395 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 CBWD5Q5RIA9 395 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 TCERG1LQ5VWI1 586 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 SASS6Q6UVJ0 657 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 C11orf57Q6ZUT1 292 aaPredicted RBP18.06■□□□□ 0.48
SYNE4-207ENST00000505054 OSTM1Q86WC4 334 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 IRF2BP1Q8IU81 584 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 SLC44A3Q8N4M1 653 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 TOP6BLQ8N6T0 577 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 KBTBD7Q8WVZ9 684 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 SYAP1Q96A49 352 aaPredicted RBP18.06■□□□□ 0.48
SYNE4-207ENST00000505054 TMEM209Q96SK2 561 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 SEMA4AQ9H3S1 761 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 TBC1D17Q9HA65 648 aa18.06■□□□□ 0.48
SYNE4-207ENST00000505054 OR6C75A6NL08 312 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms