RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PPP4R1Q8TF05 950 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 HDAC7Q8WUI4 952 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 PKD1L3Q7Z443 1732 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 RECQL4O94761 1208 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 MAP2K5Q13163 448 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 PLEKHA5Q9HAU0 1116 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 LCMT1Q9UIC8 334 aa14.81□□□□□ -0.04
TCOF1-207ENST00000504761 NFICP08651 508 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 FAXCQ5TGI0 409 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 MCOLN2Q8IZK6 566 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 PCSK9Q8NBP7 692 aaKnown RBP14.8□□□□□ -0.04
TCOF1-207ENST00000504761 TTC17Q96AE7 1141 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 GPR20Q99678 358 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 MTG1Q9BT17 334 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-207ENST00000504761 CDT1Q9H211 546 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 RBPJLQ9UBG7 517 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 STRCP1A6NGW2 1772 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 ATP9BO43861 1147 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 EIF4BP23588 611 aaKnown RBP14.8□□□□□ -0.04
TCOF1-207ENST00000504761 PNPLA4P41247 253 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 TDRD10Q5VZ19 366 aaKnown RBP14.8□□□□□ -0.04
TCOF1-207ENST00000504761 SDCCAG8Q86SQ7 713 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-207ENST00000504761 ADGRF2Q8IZF7 708 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 FSD1LQ9BXM9 530 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 CAPN7Q9Y6W3 813 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 BRAFP15056 766 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 PBX1P40424 430 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 HIF1AQ16665 826 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 FAM131BQ86XD5 332 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 TEPSINQ96N21 525 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 GAD1Q99259 594 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 ZNF536O15090 1300 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 LYPLA2O95372 231 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 APOEP02649 317 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 COILP38432 576 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-207ENST00000504761 DRP2Q13474 957 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 FAM71DQ8N9W8 422 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 ZSWIM2Q8NEG5 633 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 SOCS4Q8WXH5 440 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 TLK1Q9UKI8 766 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 TSPAN16Q9UKR8 245 aa14.8□□□□□ -0.04
TCOF1-207ENST00000504761 GSTA1P08263 222 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 GSTA2P09210 222 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 CAV1Q03135 178 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 BMT2Q1RMZ1 405 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 DEFB128Q7Z7B8 93 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 GIMAP7Q8NHV1 300 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 ATXN7L3BQ96GX2 97 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 ZNF512Q96ME7 567 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-207ENST00000504761 DDIT4Q9NX09 232 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 COL18A1P39060 1754 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 CRYBG1Q9Y4K1 1723 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 GOLGA8RI6L899 631 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 M0QYT0 321 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 LONRF1Q17RB8 773 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 CD302Q8IX05 232 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 CASKIN2Q8WXE0 1202 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 EPAS1Q99814 870 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 FIS1Q9Y3D6 152 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 SLC15A5A6NIM6 579 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 SMIM10L2AP0DMW4 78 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 SMIM10L2BP0DMW5 78 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 GUCY1A3Q02108 690 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 TTC31Q49AM3 519 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-207ENST00000504761 ZBTB41Q5SVQ8 909 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 SLC9A9Q8IVB4 645 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 CCDC197Q8NCU1 140 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 ELAC2Q9BQ52 826 aaKnown RBP14.79□□□□□ -0.04
TCOF1-207ENST00000504761 RASSF4Q9H2L5 321 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 ASB7Q9H672 318 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 BAIAP2L1Q9UHR4 511 aa14.79□□□□□ -0.04
TCOF1-207ENST00000504761 MYH14Q7Z406 1995 aaKnown RBP14.79□□□□□ -0.04
TCOF1-207ENST00000504761 PQBP1O60828 265 aaKnown RBP14.78□□□□□ -0.04
TCOF1-207ENST00000504761 SPAG7O75391 227 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 ALDH1A1P00352 501 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 GLI1P08151 1106 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 KCNA3P22001 575 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 ITGA8P53708 1063 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 NCKAP1LP55160 1127 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 PLPPR4Q7Z2D5 763 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 CDKL3Q8IVW4 592 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-207ENST00000504761 RXFP2Q8WXD0 754 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 TRAIPQ9BWF2 469 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 PPP1R12CQ9BZL4 782 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 TMEM134Q9H6X4 195 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 SMYD3Q9H7B4 428 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 NEU2Q9Y3R4 380 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 NUP188Q5SRE5 1749 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 KRT37O76014 449 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 SUN1O94901 812 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 FLT3LGP49771 235 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 MAP3K7CLP57077 242 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 RAB3IL1Q8TBN0 382 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 SEMA4DQ92854 862 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 ACO2Q99798 780 aaKnown RBP14.78□□□□□ -0.04
TCOF1-207ENST00000504761 TXNRD2Q9NNW7 524 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 IPO11Q9UI26 975 aaKnown RBP14.78□□□□□ -0.04
TCOF1-207ENST00000504761 REXO2Q9Y3B8 237 aaKnown RBP14.78□□□□□ -0.04
TCOF1-207ENST00000504761 TRIM17Q9Y577 477 aa14.78□□□□□ -0.04
TCOF1-207ENST00000504761 MRPL42Q9Y6G3 142 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms