RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 ZNF70Q9UC06 446 aaPredicted RBP6.76□□□□□ -1.33
COPB2-204ENST00000504295 SARDHQ9UL12 918 aa6.76□□□□□ -1.33
COPB2-204ENST00000504295 NEU3Q9UQ49 428 aa6.76□□□□□ -1.33
COPB2-204ENST00000504295 EME2A4GXA9 379 aaPredicted RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 CCNT2O60583 730 aaKnown RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 AOC1P19801 751 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 FGFR4P22455 802 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 BRD2P25440 801 aaKnown RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 GRIA2P42262 883 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 ECE1P42892 770 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 ASPAP45381 313 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 ITGA8P53708 1063 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 KRT17Q04695 432 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 FXNQ16595 210 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 GSTA3Q16772 222 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 ANGEL2Q5VTE6 544 aaKnown RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 PPP1R2P3Q6NXS1 205 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 APBB1IPQ7Z5R6 666 aaPredicted RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 GALNT15Q8N3T1 639 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 NSMCE1Q8WV22 266 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 CPT1BQ92523 772 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 HHIPL1Q96JK4 782 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 LXNQ9BS40 222 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 TMEM134Q9H6X4 195 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.75□□□□□ -1.33
COPB2-204ENST00000504295 CREBZFQ9NS37 354 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 STX18Q9P2W9 335 aaKnown RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 SMG5Q9UPR3 1016 aaKnown RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 KBTBD13C9JR72 458 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 PEX1O43933 1283 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 CACNG3O60359 315 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 RFPL1O75677 317 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 GABBR2O75899 941 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 PENKP01210 267 aaPredicted RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 TRIM49P0CI25 452 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 TRIM49CP0CI26 452 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 TAL1P17542 331 aaPredicted RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 NSUN2Q08J23 767 aaKnown RBP eCLIP6.75□□□□□ -1.33
COPB2-204ENST00000504295 PABPC4Q13310 644 aaKnown RBP eCLIP6.75□□□□□ -1.33
COPB2-204ENST00000504295 PGM5Q15124 567 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 Q3C1V9 767 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 SLFN13Q68D06 897 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 SLC9A4Q6AI14 798 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 BORAQ6PGQ7 559 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 U2AF1L4Q8WU68 220 aaKnown RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 MCRS1Q96EZ8 462 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 PCYT2Q99447 389 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 NUP85Q9BW27 656 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 TRIM33Q9UPN9 1127 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 ST14Q9Y5Y6 855 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 SLC4A7Q9Y6M7 1214 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 PLXNA2O75051 1894 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 PASKQ96RG2 1323 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 CASP8AP2Q9UKL3 1982 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 BACH1O14867 736 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 ATP9BO43861 1147 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 PPP1R12BO60237 982 aaPredicted RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 CTNND1O60716 968 aaKnown RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 PFKMP08237 780 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 SLC16A2P36021 539 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 OAZ1P54368 228 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 SATB1Q01826 763 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 TSR1Q2NL82 804 aaKnown RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 LBX2Q6XYB7 198 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 TRIM72Q6ZMU5 477 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 NLRX1Q86UT6 975 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 ABRAQ8N0Z2 381 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 ADAMTS16Q8TE57 1224 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 IFT81Q8WYA0 676 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 PRR11Q96HE9 360 aaPredicted RBP6.75□□□□□ -1.33
COPB2-204ENST00000504295 OLFM3Q96PB7 478 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 KIAA1683Q9H0B3 1180 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 VEZTQ9HBM0 779 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 FGFR1OP2Q9NVK5 253 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.75□□□□□ -1.33
COPB2-204ENST00000504295 ATP8A1Q9Y2Q0 1164 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 NR2E3Q9Y5X4 410 aa6.75□□□□□ -1.33
COPB2-204ENST00000504295 SDR42E2A6NKP2 422 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 FAM155AB1AL88 458 aaPredicted RBP6.74□□□□□ -1.33
COPB2-204ENST00000504295 HOXD8P13378 290 aaPredicted RBP6.74□□□□□ -1.33
COPB2-204ENST00000504295 STIP1P31948 543 aaKnown RBP6.74□□□□□ -1.33
COPB2-204ENST00000504295 ABCD1P33897 745 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 HIRAP54198 1017 aaPredicted RBP6.74□□□□□ -1.33
COPB2-204ENST00000504295 RWDD2BP57060 319 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 PDE4CQ08493 712 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 AP1B1Q10567 949 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 FASTKD3Q14CZ7 662 aaKnown RBP6.74□□□□□ -1.33
COPB2-204ENST00000504295 MAP1SQ66K74 1059 aaPredicted RBP6.74□□□□□ -1.33
COPB2-204ENST00000504295 DENND2CQ68D51 928 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 CWF19L1Q69YN2 538 aaKnown RBP6.74□□□□□ -1.33
COPB2-204ENST00000504295 ZNF746Q6NUN9 644 aaPredicted RBP6.74□□□□□ -1.33
COPB2-204ENST00000504295 PRUNE1Q86TP1 453 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 FBXO11Q86XK2 927 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 CCDC63Q8NA47 563 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 FAM151AQ8WW52 585 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 SLC44A1Q8WWI5 657 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 HINFPQ9BQA5 517 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 SNX24Q9Y343 169 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 TELO2Q9Y4R8 837 aa6.74□□□□□ -1.33
COPB2-204ENST00000504295 NME7Q9Y5B8 376 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms