RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	BCLAF3	A2AJT9	711 aa	Known RBP	13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	ANTXRL	A6NF34	631 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	DPYSL4	O14531	572 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	CDX4	O14627	284 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	DCLK1	O15075	740 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	CLDN3	O15551	220 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	RNF40	O75150	1001 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	FGF19	O95750	216 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	TOP3B	O95985	862 aa	Known RBP	13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	PIGR	P01833	764 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	CHRM1	P11229	460 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	KCNA4	P22459	653 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	U2AF2	P26368	475 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	GALK1	P51570	392 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	SLC12A3	P55017	1021 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	PSAPL1	Q6NUJ1	521 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	SLC39A4	Q6P5W5	647 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	CAMKK1	Q8N5S9	505 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	SYT2	Q8N9I0	419 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	FIZ1	Q96SL8	496 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	TIPIN	Q9BVW5	301 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	EBF3	Q9H4W6	596 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	EBF1	Q9UH73	591 aa		13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	ZNF638	Q14966	1978 aa	Known RBP	13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	ASCC3	Q8N3C0	2202 aa	Known RBP	13.74	□□□□□ -0.21
LMNA-218	ENST00000502357	PCNX2	A6NKB5	2137 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	ANAPC1	Q9H1A4	1944 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	TADA3	O75528	432 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	HAPLN1	P10915	354 aa	Predicted RBP	13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	ARSA	P15289	507 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	CDC25C	P30307	473 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	SLC39A12	Q504Y0	691 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	ARHGAP15	Q53QZ3	475 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	C9orf57	Q5W0N0	161 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	UNQ6494/PRO21346	Q6UXR6	183 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	DSTYK	Q6XUX3	929 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	HAUS6	Q7Z4H7	955 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	ITIH5	Q86UX2	942 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	GATA6	Q92908	595 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	C8orf76	Q96K31	380 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	TMLHE	Q9NVH6	421 aa		13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	CPSF3	Q9UKF6	684 aa	Known RBP	13.73	□□□□□ -0.21
LMNA-218	ENST00000502357	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-218	ENST00000502357		A0A0B4J269	797 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	LNP1	A1A4G5	178 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	ATG13	O75143	517 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	NFIC	P08651	508 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	CCDC192	P0DO97	292 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	SPINK2	P20155	84 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	NMT1	P30419	496 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	PRPH	P41219	470 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	TUFM	P49411	452 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	NLRP12	P59046	1061 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	RAD51AP2	Q09MP3	1159 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	COL9A2	Q14055	689 aa	Predicted RBP	13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	RNF43	Q68DV7	783 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	SCARA3	Q6AZY7	606 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	JADE1	Q6IE81	842 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	SYT13	Q7L8C5	426 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	USP37	Q86T82	979 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	GIPC2	Q8TF65	315 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	HHIP	Q96QV1	700 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	TSPAN18	Q96SJ8	248 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	CCSER1	Q9C0I3	900 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	SLC8A2	Q9UPR5	921 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	STK24	Q9Y6E0	443 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	DMXL2	Q8TDJ6	3036 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	PKD1L2	Q7Z442	2459 aa		13.72	□□□□□ -0.21
LMNA-218	ENST00000502357	THADA	Q6YHU6	1953 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	C4orf47	A7E2U8	309 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	OGT	O15294	1046 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	GJA4	P35212	333 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	GPR15	P49685	360 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	NEK4	P51957	841 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	PPP2R3A	Q06190	1150 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	STRN3	Q13033	797 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	ZNF268	Q14587	947 aa	Predicted RBP	13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	SAFB	Q15424	915 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	GAB4	Q2WGN9	574 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	TXNDC8	Q6A555	127 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	MAB21L3	Q8N8X9	362 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	STKLD1	Q8NE28	680 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	FAM200A	Q8TCP9	573 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	SEPT5	Q99719	369 aa	Predicted RBP	13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	EDEM2	Q9BV94	578 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	TDP1	Q9NUW8	608 aa		13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	THG1L	Q9NWX6	298 aa	Known RBP	13.71	□□□□□ -0.21
LMNA-218	ENST00000502357	FASN	P49327	2511 aa	Known RBP	13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	SOBP	A7XYQ1	873 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	ODC1	P11926	461 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	DRD1	P21728	446 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	PAX3	P23760	479 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	NOVA1	P51513	510 aa	Known RBP	13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	PTPA	Q15257	358 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	MGAT5B	Q3V5L5	792 aa		13.7	□□□□□ -0.22
LMNA-218	ENST00000502357	TMEM119	Q4V9L6	283 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms