RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SMCHD1A6NHR9 2005 aa5.84□□□□□ -1.48
HMGXB4-208ENST00000498325 SYNRGQ9UMZ2 1314 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 LOC102724159A0A0B4J2E5 919 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 MED19A0JLT2 244 aaPredicted RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 MYMKA6NI61 221 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 K7ESM1 405 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 CHMP2AO43633 222 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 EIF3JO75822 258 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 EYA4O95677 639 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 FGFR1OPO95684 399 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 P4HBP07237 508 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 IDEP14735 1019 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 SFNP31947 248 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 GCLCP48506 637 aaPredicted RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 KCNC1P48547 511 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 JAK3P52333 1124 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 UBASH3AP57075 661 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 FANCCQ00597 558 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 RPL6Q02878 288 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 SPAG1Q07617 926 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 PAK1Q13153 545 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 PWP2Q15269 919 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 TSNAXIP1Q2TAA8 658 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 FILIP1LQ4L180 1135 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 GJC2Q5T442 439 aaPredicted RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 KLHL10Q6JEL2 608 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 AGMOQ6ZNB7 445 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 C16orf59Q7L2K0 433 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 GPBP1Q86WP2 473 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 TPH2Q8IWU9 490 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 ADSSL1Q8N142 457 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 RDM1Q8NG50 284 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 IL31RAQ8NI17 732 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 NOC3LQ8WTT2 800 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 HERVK_113Q902F9 699 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 DYDC2Q96IM9 177 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 KREMEN1Q96MU8 473 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 CTAGE1Q96RT6 745 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 MAP7D2Q96T17 732 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 HSD17B14Q9BPX1 270 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.83□□□□□ -1.489e-7■□□□□ 10.7
HMGXB4-208ENST00000498325 MOV10L1Q9BXT6 1211 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 UNC45AQ9H3U1 944 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 ZSWIM4Q9H7M6 989 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 PANK4Q9NVE7 773 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 FAM86C1Q9NVL1 165 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 FANCLQ9NW38 375 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 KCND2Q9NZV8 630 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 RBPJLQ9UBG7 517 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 CNOT11Q9UKZ1 510 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 NFE2L3Q9Y4A8 694 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 PTPRFP10586 1907 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 PKD1L2Q7Z442 2459 aa5.83□□□□□ -1.48
HMGXB4-208ENST00000498325 NFASCO94856 1347 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 DDX39AO00148 427 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 DNM1LO00429 736 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 AP5Z1O43299 807 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 CNMDO75829 334 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 MPOP05164 745 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 TGFB3P10600 412 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 FCER1AP12319 257 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 GAP43P17677 238 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 CYP11B2P19099 503 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 ERCC3P19447 782 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 CCNE1P24864 410 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 MSNP26038 577 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 PRCPP42785 496 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 QARSP47897 775 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 ALDH5A1P51649 535 aaPredicted RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 STX17P56962 302 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 ERVFRD-1P60508 538 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 CYP4A11Q02928 519 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 FPGSQ05932 587 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 TCF15Q12870 199 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 CTTNQ14247 550 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 FAM110CQ1W6H9 321 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 HERC4Q5GLZ8 1057 aaPredicted RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 KCNV1Q6PIU1 500 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 B3GNT9Q6UX72 402 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 OTUD6AQ7L8S5 288 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 TMC6Q7Z403 805 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 KCNK18Q7Z418 384 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 FAM114A1Q8IWE2 563 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 SMAP1Q8IYB5 467 aaPredicted RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 MYOCDQ8IZQ8 938 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 GUF1Q8N442 669 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 GPRC5AQ8NFJ5 357 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 LRRC15Q8TF66 581 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 NELFBQ8WX92 580 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 DNAJC19Q96DA6 116 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 CCDC43Q96MW1 224 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 INPP4AQ96PE3 977 aaPredicted RBP5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 MMP19Q99542 508 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 TSG101Q99816 390 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 SENP7Q9BQF6 1050 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 RGL1Q9NZL6 768 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 IFNKQ9P0W0 207 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 KLHL14Q9P2G3 628 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 IMPACTQ9P2X3 320 aa5.82□□□□□ -1.48
HMGXB4-208ENST00000498325 MAGEC2Q9UBF1 373 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms