RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 EFCAB13Q8IY85 973 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 SPPL2BQ8TCT7 592 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 NOC3LQ8WTT2 800 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 SAAL1Q96ER3 474 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 MSANTD3Q96H12 275 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 IER2Q9BTL4 223 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 ZSCAN32Q9NX65 697 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 RBAKQ9NYW8 714 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 PCDHGA2Q9Y5H1 932 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 FANCMQ8IYD8 2048 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 FRMD3A2A2Y4 597 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 KIAA0391O15091 583 aaKnown RBP12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 CHADO15335 359 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 EXTL3O43909 919 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 HUS1O60921 280 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 ID4P47928 161 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 NASPP49321 788 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 CASP5P51878 434 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 KPNA1P52294 538 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 FOXK2Q01167 660 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 TSPY1Q01534 308 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 PDILTQ8N807 584 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 RUBCNQ92622 972 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 ZNF396Q96N95 335 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 LPIN3Q9BQK8 851 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 FAM126AQ9BYI3 521 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 BACH2Q9BYV9 841 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 C8orf33Q9H7E9 229 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 OBP2AQ9NY56 170 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 ABI2Q9NYB9 513 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 ZMYM5Q9UJ78 669 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 AGAP1Q9UPQ3 857 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 R3HCC1Q9Y3T6 440 aaKnown RBP12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 PCDHB5Q9Y5E4 795 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 USP34Q70CQ2 3546 aa12.67□□□□□ -0.38
NUDCD3-211ENST00000497978 TICRRQ7Z2Z1 1910 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 A0A087X0B3 334 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 GOLGA8IPA6NC78 632 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 SHISA7A6NL88 538 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 GOLGA8JA6NMD2 632 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 SPTLC2O15270 562 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 ITGB3P05106 788 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 KRT19P08727 400 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 HAPLN1P10915 354 aaPredicted RBP12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 CCNE1P24864 410 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 WEE1P30291 646 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 POLR2BP30876 1174 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 NRLP54845 237 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 AMPD3Q01432 767 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 FCHO2Q0JRZ9 810 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 BFSP1Q12934 665 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 MTAPQ13126 283 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 FZD5Q13467 585 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 ARHGAP29Q52LW3 1261 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 STXBP5Q5T5C0 1151 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 LRRTM3Q86VH5 581 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 TMEM86AQ8N2M4 240 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 CSGALNACT2Q8N6G5 542 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 LRRC52Q8N7C0 313 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 LINC00301Q8NCQ3 95 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 SECISBP2LQ93073 1101 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 TNMDQ9H2S6 317 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 CHRDQ9H2X0 955 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 CUEDC2Q9H467 287 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 PCIF1Q9H4Z3 704 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 TASP1Q9H6P5 420 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 LMAN1LQ9HAT1 526 aa12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 PRMT8Q9NR22 394 aaPredicted RBP12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 THG1LQ9NWX6 298 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-211ENST00000497978 ARNTLO00327 626 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 PPP6R2O75170 966 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 PRPF6O94906 941 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 TMEM191BP0C7N4 346 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 ATF6P18850 670 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 CCR3P51677 355 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 CDR1P51861 262 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 RBP5P82980 135 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 MYL7Q01449 175 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 LRRC32Q14392 662 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 MAMSTRQ6ZN01 415 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 KIAA2013Q8IYS2 634 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 GPD1LQ8N335 351 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 PDCL2Q8N4E4 241 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 C1orf127Q8N9H9 656 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 SUMF1Q8NBK3 374 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 ZBTB44Q8NCP5 570 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 ZSWIM2Q8NEG5 633 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 BPIFB1Q8TDL5 484 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 SLC39A7Q92504 469 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 RSPRY1Q96DX4 576 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 ANKRD36BP1Q96IX9 119 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 ACBD6Q9BR61 282 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 CBWD1Q9BRT8 395 aa12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 DDX43Q9NXZ2 648 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-211ENST00000497978 NCDNQ9UBB6 729 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms