RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, human

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IVD-209	ENST00000497816		A0A1W2PQ64	194 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816		A0A1W2PQD8	194 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	HUS1	O60921	280 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	TNNC2	P02585	160 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	ATF6	P18850	670 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	SYK	P43405	635 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	SMARCB1	Q12824	385 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	PSMD6	Q15008	389 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	TEAD2	Q15562	447 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	DUOXA2	Q1HG44	320 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	PHLDB3	Q6NSJ2	640 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	LIMS2	Q7Z4I7	341 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	OSTM1	Q86WC4	334 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	TMEM86A	Q8N2M4	240 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	SPPL2B	Q8TCT7	592 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	SEPT5	Q99719	369 aa	Predicted RBP	15.7	■□□□□ 0.1
IVD-209	ENST00000497816	ZNF334	Q9HCZ1	680 aa	Predicted RBP	15.7	■□□□□ 0.1
IVD-209	ENST00000497816	EXOC1	Q9NV70	894 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	TMLHE	Q9NVH6	421 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	CIZ1	Q9ULV3	898 aa	Predicted RBP	15.7	■□□□□ 0.1
IVD-209	ENST00000497816	SNX9	Q9Y5X1	595 aa		15.7	■□□□□ 0.1
IVD-209	ENST00000497816	MYL1	P05976	194 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	TUFM	P49411	452 aa	Known RBP	15.69	■□□□□ 0.1
IVD-209	ENST00000497816	STARD6	P59095	220 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	PSMD2	Q13200	908 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	SOWAHA	Q2M3V2	549 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	MGAT5B	Q3V5L5	792 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	GAREM2	Q75VX8	874 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	15.69	■□□□□ 0.1
IVD-209	ENST00000497816	DCP1B	Q8IZD4	617 aa	Known RBP	15.69	■□□□□ 0.1
IVD-209	ENST00000497816	TOP6BL	Q8N6T0	577 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	SPATA18	Q8TC71	538 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	SMARCD2	Q92925	531 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	PHOX2B	Q99453	314 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	PKMYT1	Q99640	499 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	CGRRF1	Q99675	332 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	LPIN3	Q9BQK8	851 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	ACBD6	Q9BR61	282 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	GOLPH3L	Q9H4A5	285 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	TRPV4	Q9HBA0	871 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	ZFP14	Q9HCL3	533 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816	DDX43	Q9NXZ2	648 aa	Known RBP	15.69	■□□□□ 0.1
IVD-209	ENST00000497816	NCAN	O14594	1321 aa		15.69	■□□□□ 0.1
IVD-209	ENST00000497816		A0A1W2PRU2	124 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	GABRD	O14764	452 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	PRR29	P0C7W0	189 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	DLAT	P10515	647 aa	Known RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	HAPLN1	P10915	354 aa	Predicted RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	TSPY1	Q01534	308 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	MYO1E	Q12965	1108 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	TRAPPC11	Q7Z392	1133 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	ITIH5	Q86UX2	942 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	CCDC105	Q8IYK2	499 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	ADGRF2	Q8IZF7	708 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	FSIP1	Q8NA03	581 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	CCDC127	Q96BQ5	260 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	HPDL	Q96IR7	371 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	MKNK1	Q9BUB5	465 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	DDX23	Q9BUQ8	820 aa	Known RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	GPR88	Q9GZN0	384 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	KCTD10	Q9H3F6	313 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	GDPD2	Q9HCC8	539 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	ABI2	Q9NYB9	513 aa	Predicted RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	FANCM	Q8IYD8	2048 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	USP34	Q70CQ2	3546 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	MYO15A	Q9UKN7	3530 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	VPS13A	Q96RL7	3174 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816		H0Y858	1186 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	STK25	O00506	426 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	HCRT	O43612	131 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	PRPF40A	O75400	957 aa	Known RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	RPN1	P04843	607 aa	Known RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	ACAT1	P24752	427 aa	Known RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	MYL7	Q01449	175 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	PFKP	Q01813	784 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	SNW1	Q13573	536 aa	Known RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	MLF2	Q15773	248 aa	Predicted RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	CCDC142	Q17RM4	750 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	SLC44A4	Q53GD3	710 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	INTS6L	Q5JSJ4	861 aa	Known RBP	15.68	■□□□□ 0.1
IVD-209	ENST00000497816	STXBP5	Q5T5C0	1151 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	VIT	Q6UXI7	678 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	DPH6	Q7L8W6	267 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	GOLGA5	Q8TBA6	731 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	PLEKHO2	Q8TD55	490 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	TMEM174	Q8WUU8	243 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	KBTBD7	Q8WVZ9	684 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	ZNF516	Q92618	1163 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	FNBP1	Q96RU3	617 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	IRF2BPL	Q9H1B7	796 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	IL21	Q9HBE4	155 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	DMAC2	Q9NW81	257 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	PCDHB5	Q9Y5E4	795 aa		15.68	■□□□□ 0.1
IVD-209	ENST00000497816	EXOC3	O60645	756 aa		15.67	■□□□□ 0.1
IVD-209	ENST00000497816	CST3	P01034	146 aa	Predicted RBP	15.67	■□□□□ 0.1
IVD-209	ENST00000497816	TNNI1	P19237	187 aa		15.67	■□□□□ 0.1
IVD-209	ENST00000497816	RFX1	P22670	979 aa		15.67	■□□□□ 0.1
IVD-209	ENST00000497816	GABRR2	P28476	465 aa		15.67	■□□□□ 0.1
IVD-209	ENST00000497816	VIPR2	P41587	438 aa		15.67	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms